DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10417 and ppm-2

DIOPT Version :9

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001369858.1 Gene:ppm-2 / 175610 WormBaseID:WBGene00011953 Length:356 Species:Caenorhabditis elegans


Alignment Length:660 Identity:157/660 - (23%)
Similarity:213/660 - (32%) Gaps:325/660 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAYLSHPKTDKTSTDQFNELLAVGASSMQGWRNSQEDAHNSILNF--DNNTSFFAVYDGHGGAE 63
            ||..||.|.|.|.|....||...||:|.|||||...||||..:|:.  |...:||||||||||::
 Worm     1 MGQTLSEPVTKKESASCANENYLVGSSCMQGWRVDMEDAHTHLLSLPDDPKCAFFAVYDGHGGSK 65

  Fly    64 VAQYCADKLPHFLKNLETYKNGQFEVALKEAFLGFDKTLLDPSIVSILKILAGEHNFVDAEADDY 128
            |:||....|...:...:.:..|..:.|:::.||..|:                            
 Worm    66 VSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQ---------------------------- 102

  Fly   129 EEEDLAELQEESNLPLNEVLEKYKGLPQKKDLDLKSSDHKENFKMRSPYFRGRRAAALAAEATNK 193
                                                       :||.                  
 Worm   103 -------------------------------------------QMRV------------------ 106

  Fly   194 AVMDPSAKPDGSSTSAAAAAAALSADGVANSRNPSNVVNPMAGADSNTTTSINDLSTKNAALKDD 258
                                                                             
 Worm   107 ----------------------------------------------------------------- 106

  Fly   259 SVNDQNEGSNGTDFKHTLVSSSNKKLFATGSNDMTELNQSSKNEFTNSSTSKEFERNINSSQDDE 323
                                                                           ||
 Worm   107 ---------------------------------------------------------------DE 108

  Fly   324 FTDDDADYEENDNVKSPDTSSAESSDCTENDDDGDEDGNEDSDEEETDEDQMANDNFCANMIEEP 388
            .|.||.                                                           
 Worm   109 ETKDDV----------------------------------------------------------- 114

  Fly   389 GKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTLDG 453
               ||.||||.|::..|:|..||||||.|.|..|:|..:|.||||..:.||.|||.|||.|..: 
 Worm   115 ---SGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGGWVEFN- 175

  Fly   454 RVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVV 518
            ||||.|.|||||||.|:|...|.|||||:::|.||:....:||:.||:||||||||:.|:::|||
 Worm   176 RVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKLTPDHEFIVLACDGIWDVMTNQEVV 240

  Fly   519 EFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIVQFKKKLQELQSTIPPNQTEDK 583
            :|||.:|.:.:...:|||||...||||:....|.||||||.|:|                     
 Worm   241 DFVREKLAEKRDPQSICEELLTRCLAPDCQMGGLGCDNMTVVLV--------------------- 284

  Fly   584 LLKTSENVSHSLNDQSASKRCAS-------QNADADDEILEKNNSK---------RLKTDLEQEN 632
                  .:.|..:..:...:||.       .|.|.|...::::.|:         |:....::|.
 Worm   285 ------GLLHGQSPDTLFTKCARPAVFTGVNNEDGDQNQIQQDISRVINNFDGEQRVNAANQEEE 343

  Fly   633 IKDRTPSPSN 642
            ..|..|:|:|
 Worm   344 EDDNEPAPAN 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625 34/83 (41%)
PP2Cc <374..564 CDD:238083 94/189 (50%)
ppm-2NP_001369858.1 PP2Cc 22..286 CDD:238083 134/570 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161231
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D957254at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1847
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.650

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