DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10417 and fem-2

DIOPT Version :10

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_497224.1 Gene:fem-2 / 175217 WormBaseID:WBGene00001412 Length:449 Species:Caenorhabditis elegans


Alignment Length:266 Identity:71/266 - (26%)
Similarity:117/266 - (43%) Gaps:63/266 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 DEEETDEDQ------MANDNFCANMIEEPGKDSGCTAVVCLLQGRDLYVANA--GDSRCVISRSG 422
            |..::.|||      :.::......::|..| .|.|||.|.:......:|.|  |||...:..:.
 Worm   229 DPSDSLEDQLRKSLELLDERMTVRSVKECWK-GGSTAVCCAIDMDQKLMALAWLGDSPGYVMSNI 292

  Fly   423 QAIEMSIDHKPEDDEEASRIIKAGGRVTLDG---RVNGGLNLSRALGDHAYKTNVTLPAEEQMIS 484
            :..:::..|.|.|:.||.|:.:|||::.:.|   ||||.|||:|||||        :|. ..|||
 Worm   293 EFRQLTRGHSPSDEREARRVEEAGGQLFVIGGELRVNGVLNLTRALGD--------VPG-RPMIS 348

  Fly   485 ALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFVRC-----RLKDNKKLST-ICEELFDNCL 543
            ..|:..::.|...|..::||||||.:..:..::.:.|..     .::|..:||. ||.:..    
 Worm   349 NEPETCQVPIESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVEDYAELSRFICTKAI---- 409

  Fly   544 APNTMGDGTGCDNMTAVIVQFKKKLQELQSTIPPNQTEDKLLKTSENVSHSLNDQSASKRCASQN 608
                  :....||::.||           ..:.|.|...||:|      |..:|         ::
 Worm   410 ------EAGSADNVSVVI-----------GFLRPPQDVWKLMK------HESDD---------ED 442

  Fly   609 ADADDE 614
            :|..||
 Worm   443 SDVTDE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625
PP2Cc <374..564 CDD:238083 58/206 (28%)
fem-2NP_497224.1 PP2C 161..417 CDD:395385 58/207 (28%)
Blue background indicates that the domain is not in the aligned region.

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