DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10417 and pdp-1

DIOPT Version :9

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_491357.1 Gene:pdp-1 / 172035 WormBaseID:WBGene00022832 Length:451 Species:Caenorhabditis elegans


Alignment Length:244 Identity:65/244 - (26%)
Similarity:101/244 - (41%) Gaps:56/244 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 SGCTAVVCLLQGRDLYVANAGDSRCVI-----SRSGQAIEMSIDHKPEDDEEASRI-----IKAG 446
            ||....:..::.|.|:|||.||:..|:     :.|..|.::|..|..::.:|..||     ....
 Worm   190 SGSCCTLAHIRSRHLHVANLGDAAAVLGVVNPNGSVTARQLSRAHCVDNADEVHRIRIAHPASES 254

  Fly   447 GRVTLDGRVNGGLNLSRALGDHAYKTNVTL----------PAEEQM-----ISALPDIKKLIITP 496
            ..|...||:.|.|...||.||..||..:.|          |..:.:     :|..|::....:||
 Worm   255 QTVLRGGRLLGELFPLRAFGDVRYKWPLDLQKVVLEPLGHPPPQHLFTPPYLSTSPEVFYHKLTP 319

  Fly   497 EDEFMVLACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVI 561
            .|.|:|||.||:|.::..:.||     ||..:..|.||.::       |.....||   ::..|.
 Worm   320 NDRFLVLATDGLWEWLDPDTVV-----RLVHDHTLGTITQQ-------PYVPKSGT---SLRQVR 369

  Fly   562 VQFKKKLQELQSTIPPNQTEDKLLKTSEN-----VSHSLNDQS--ASKR 603
            .|.|.:.:..|.|..|         ..||     :.|:|...|  |:|:
 Worm   370 EQLKDRARGEQKTKKP---------IDENCATHIIRHALGGVSGGATKQ 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625
PP2Cc <374..564 CDD:238083 53/196 (27%)
pdp-1NP_491357.1 PP2Cc 43..438 CDD:238083 65/244 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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