DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX4L and COX5A

DIOPT Version :9

Sequence 1:NP_610168.1 Gene:COX4L / 35491 FlyBaseID:FBgn0033020 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_014346.1 Gene:COX5A / 855675 SGDID:S000004997 Length:153 Species:Saccharomyces cerevisiae


Alignment Length:157 Identity:35/157 - (22%)
Similarity:60/157 - (38%) Gaps:19/157 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MTRRRFASGGDGIRLMVADRQVVGHGI-NGRPIYFDSPDCPFPAIRYREVSPELCALREKELDDW 78
            |.|..|...| |:..:.:.|....|.: |...:...|.....|:...:::   :..|.|::...|
Yeast     1 MLRNTFTRAG-GLSRITSVRFAQTHALSNAAVMDLQSRWENMPSTEQQDI---VSKLSERQKLPW 61

  Fly    79 KKLSLDEKKQLYRYSFCQTYAEFQHITPEWK------MCLGVALWLV-SIGIAISITMKTVLYGK 136
            .:|:..||:.::..|    |.|:....|...      :..|||..|: |:|:...:.|..   |:
Yeast    62 AQLTEPEKQAVWYIS----YGEWGPRRPVLNKGDSSFIAKGVAAGLLFSVGLFAVVRMAG---GQ 119

  Fly   137 LPDTFNDERQSAQLRRIIQLQMNPITG 163
            ...|.|.|.|......:.....||..|
Yeast   120 DAKTMNKEWQLKSDEYLKSKNANPWGG 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX4LNP_610168.1 COX4 45..176 CDD:281003 27/126 (21%)
COX5ANP_014346.1 COX4 34..152 CDD:397197 27/123 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344616
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4075
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103849
Panther 1 1.100 - - O PTHR10707
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X922
TreeFam 00.000 Not matched by this tool.
65.830

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