DRSC/TRiP Functional Genomics Resources

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Protein Alignment sxc and GTF3C3

DIOPT Version :10

Sequence 1:NP_523620.1 Gene:sxc / 35486 FlyBaseID:FBgn0261403 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_036218.1 Gene:GTF3C3 / 9330 HGNCID:4666 Length:886 Species:Homo sapiens


Alignment Length:920 Identity:172/920 - (18%)
Similarity:325/920 - (35%) Gaps:289/920 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EQTRINMQSQGQSHQLPSAAHILLDQNPNSTGSNLVVKQNDI-QSLSSVGLLELAHREYQAV--- 64
            |:.:::.:......::||::.|      |||.|    :..|: :..:|.|:.:..|:.:.::   
Human    38 EKGKLSAEENPDDSEVPSSSGI------NSTKS----QDKDVNEGETSDGVRKSVHKVFASMLGE 92

  Fly    65 --DYESAEKHCMQLWRQDST----NTGVLLLL-------------------------------SS 92
              |.|..|:...:...::.|    ..|.:.:|                               ::
Human    93 NEDDEEEEEEEEEEEEEEETPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEAN 157

  Fly    93 IHFQCRRLDKSAQFSTLAIKQNPVLAEAYSNLGNVFKERGQLQEALDNYRRAVRLKPDFIDGYIN 157
            |.|.....:::.......|:|.|:..|.:|.|..:::::|.::::|.....|..|.|...:.::.
Human   158 IRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVR 222

  Fly   158 LAAALVAARDMESAVQAYITALQYNP----------DLYCVRSD----------LGNLLK----- 197
            ||...:...:::.|:..|..||:|.|          .||....|          :.|||.     
Human   223 LAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGE 287

  Fly   198 ---ALGRLEEAKACYLKAIETCPGFAV---AWS-NLGCV----FNAQGEIWLAIHHFEKAVTLDP 251
               .|.| :.||: |.:|.:......:   |:| :.|.|    .|...|::::...::||:.:..
Human   288 RFMQLAR-DMAKS-YYEANDVTSAINIIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEIIT 350

  Fly   252 NFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIE 316
            :|       ..::.|.:..:...:..    |.:|.      |:.|...:...||:.:......:.
Human   351 DF-------SGIVLEKKTSEEGTSEE----NKAPE------NVTCTIPDGVPIDITVKLMVCLVH 398

  Fly   317 ---LQPNFP--------------DAYCNLANALKEKGQVKEAEDCYNTALRL-----CS------ 353
               |:|..|              |.|.::|.|..:.|:       ||:||.|     ||      
Human   399 LNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGE-------YNSALPLLSALVCSERYNLA 456

  Fly   354 ----NHADSLNNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLKEALMHYK 414
                .||:.|..|       ||:|.|...|.|.:::.|....|..:|:::.||.|:.::||    
Human   457 VVWLRHAECLKAL-------GYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGQPEKAL---- 510

  Fly   415 EAIRIQPTF-ADAYSNMGNTLKE----------LQDVSGALQCYTRA----------IQINPA-- 456
            ||  ::|.: .|..:...|..::          |....|.:..|...          :.:|.|  
Human   511 EA--LEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKVAMNRAQV 573

  Fly   457 -------FADAHSNLASIHKD---------SGNI-PEAIQSYRTALKLKPDFPDAYCNLAHCLQI 504
                   ..:.|..|..:.:|         |.|. .:||.:..|::..|.|:   :..|...:..
Human   574 CLISSSKSGERHLYLIKVSRDKISDSNDQESANCDAKAIFAVLTSVLTKDDW---WNLLLKAIYS 635

  Fly   505 VCDWTDYDIRMKKLVSIVTEQLEKNRLPSVHPHHSMLYPLTHDCRKAIAARHANLCLEKVHVLHK 569
            :||.:    |.::...:|...||             .|....|.:|.....:..|....:....:
Human   636 LCDLS----RFQEAELLVDSSLE-------------YYSFYDDRQKRKELEYFGLSAAILDKNFR 683

  Fly   570 KPYNFLKKL----PTKGRL-----RIGYLSSDFGNH----------PTSHLMQSVPGLHDRSKVE 615
            |.||:::.:    ..|.:|     ::...|.|..:|          |.:|.:..:.| |:.....
Human   684 KAYNYIRIMVMENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPENHALCVLNG-HNAFVSG 747

  Fly   616 IFCYALS---------PDD-------GTTFRHKISRE---------SENFVDLSQ-IPCNGKAAD 654
            .|.:||.         ||:       |.||.|..|::         .:.|..|:: :...|...:
Human   748 SFKHALGQYVQAFRTHPDEPLYSFCIGLTFIHMASQKYVLRRHALIVQGFSFLNRYLSLRGPCQE 812

  Fly   655 KIFNDG--------IHILVNMNGYTKGARNEIFALRPAPIQVMWLGYPGTSGASFMDYIITDSVT 711
            ..:|.|        ||:.::.  |.|       ||...|:.|        .|.......:...:.
Human   813 SFYNLGRGLHQLGLIHLAIHY--YQK-------ALELPPLVV--------EGIELDQLDLRRDIA 860

  Fly   712 SPLELAYQYS 721
            ..|.|.||.|
Human   861 YNLSLIYQSS 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sxcNP_523620.1 TPR repeat 53..78 CDD:276809 4/29 (14%)
TPR 80..318 CDD:440225 52/311 (17%)
TPR repeat 86..112 CDD:276809 3/56 (5%)
TPR repeat 118..146 CDD:276809 6/27 (22%)
TPR repeat 151..181 CDD:276809 6/29 (21%)
LapB 219..486 CDD:442196 67/346 (19%)
TPR repeat 220..248 CDD:276809 8/35 (23%)
TPR repeat 255..282 CDD:276809 1/26 (4%)
TPR repeat 287..317 CDD:276809 4/32 (13%)
TPR repeat 322..350 CDD:276809 9/41 (22%)
TPR repeat 355..385 CDD:276809 10/29 (34%)
TPR repeat 390..418 CDD:276809 9/27 (33%)
TPR repeat 423..453 CDD:276809 5/50 (10%)
TPR repeat 458..486 CDD:276809 8/37 (22%)
Glyco_transf_41 505..1036 CDD:404688 51/270 (19%)
GTF3C3NP_036218.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..121 17/92 (18%)
LapB <146..351 CDD:442196 41/206 (20%)
TPR 1 149..182 5/32 (16%)
TPR repeat 152..177 CDD:276809 2/24 (8%)
TPR 2 183..216 8/32 (25%)
TPR repeat 183..211 CDD:276809 6/27 (22%)
TPR repeat 216..246 CDD:276809 6/29 (21%)
TPR 3 217..250 8/32 (25%)
TPR repeat 251..278 CDD:276809 3/26 (12%)
TPR 4 252..284 6/31 (19%)
TPR repeat 286..316 CDD:276809 6/31 (19%)
TPR 5 290..323 8/34 (24%)
TPR 6 326..361 6/41 (15%)
Spy 408..>514 CDD:443119 32/125 (26%)
TPR 7 421..454 12/39 (31%)
TPR repeat 422..449 CDD:276809 10/33 (30%)
TPR repeat 454..485 CDD:276809 10/37 (27%)
TPR 8 456..489 11/39 (28%)
TPR repeat 490..514 CDD:276809 9/29 (31%)
TPR 9 491..523 11/37 (30%)
Spy 729..>842 CDD:443119 25/122 (20%)
TPR 10 733..766 7/33 (21%)
TPR repeat 766..806 CDD:276809 7/39 (18%)
TPR 11 811..844 9/41 (22%)
TPR repeat 811..839 CDD:276809 7/36 (19%)
TPR repeat 845..880 CDD:276809 7/34 (21%)

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