DRSC/TRiP Functional Genomics Resources

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Protein Alignment sxc and AT1G17680

DIOPT Version :10

Sequence 1:NP_523620.1 Gene:sxc / 35486 FlyBaseID:FBgn0261403 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_173210.3 Gene:AT1G17680 / 838344 AraportID:AT1G17680 Length:896 Species:Arabidopsis thaliana


Alignment Length:874 Identity:163/874 - (18%)
Similarity:286/874 - (32%) Gaps:269/874 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 QFSTLAIKQNPVLAEAYSNLGNV------------FKERGQLQEALDNYRRAVR-------LKPD 150
            ::..||.::...||::..|..|:            |...|:.::: ..|::..|       :.||
plant    88 EYEALAERKRKALADSQRNPSNISNSTSGVEGFMEFMSSGRRRKS-RKYKKKGRRPGSKKEVAPD 151

  Fly   151 FIDGYINLAAALVAARDMESAVQAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET 215
            .:..:..........||:| |:...:..::..|........|..:.:.||:.|.:....||....
plant   152 ILKRFREALFLHAHGRDIE-ALPILVEVIKQAPAFDIAYYYLSRVSEQLGKTESSSTEALKIAAN 215

  Fly   216 CPGF-AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN-------FLDAYINLGNVLKEARIFDR 272
            ..|. :..|..|...|..|..|.:|..:..||:..||:       :.|..:|.|...:.|..|::
plant   216 IKGSKSPFWKLLYERFKEQENISVARSYASKAIQADPDDIPLKYEYADICLNTGKYREAAETFEQ 280

  Fly   273 --------------AVAAYL------RALNLSPNNAVVHGN---------LACVYYEQGLIDLAI 308
                          .|..:|      ||.::..::...|.:         ||.|:       :.|
plant   281 IFRRCPERIEALKWGVQYFLKSGEGERAASILEDHIKSHSSEVGHDVLDLLASVF-------MKI 338

  Fly   309 DTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADSLNNLANIKREQGYIE 373
            :.:.||::...:....| |:...|....::::|         :|..|.:.:....::        
plant   339 NAHDRALKYIHDVRQIY-NVGKELSSSLKIRQA---------ICHVHLEEMEQAESV-------- 385

  Fly   374 EATRLYLKALEVFPDFAAAH-----SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNT 433
                     |.:.|..|.:.     :|||..|...|....||.:|.|||. :|...:.:..:...
plant   386 ---------LSILPQEAVSEHPELITNLADELTNIGNFHSALKYYIEAIS-EPVNGNLFVKIARC 440

  Fly   434 LKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK-PDFPDA--- 494
            ...|::...|:..|.:|:.......|....|||:..:.|...||:      |.|. |:.||.   
plant   441 YMSLEERKQAIVFYYKALNELSDTVDVRITLASLLLEDGKRDEAV------LVLSPPENPDPDTA 499

  Fly   495 --------------YCNLAH-----------CLQIVCDWT---DYDIRMKKLVSIVTEQLEKNRL 531
                          .|.:.|           .||:|..|.   ....:.|:||....::.:|.|.
plant   500 KLKAWWKNRKIRMNLCQIYHSEGMLEDFANTALQLVLKWVWRRTVKGKRKRLVLSEHQRNKKRRR 564

  Fly   532 PSVHPHHSMLYPLTHDCRK---------------AIAARHANLCLE-KVHVLHKKPYNFL----- 575
            |. ....|.|.......||               ||.|.:.::|.| :..|:..:.|:.|     
plant   565 PR-DAQASQLRGGPKKWRKIRATLNETRRIRERAAIKAHNEDVCSESEEEVIKDEEYHRLFVDLC 628

  Fly   576 KKLPTKGR----LRIGYLSS--DFGNHP--TSHLMQSVPGLHDRSKVEIFCYALSPDDGTTFRHK 632
            |.|.:..|    |.|..|:.  |....|  |...:||:       ..:|.|..:.|         
plant   629 KALASLQRYWEALEIVNLARRLDAKMLPVETKKELQSL-------GAKISCDTMDP--------- 677

  Fly   633 ISRESENFVDLSQIPCNGKAADKIFNDGIHILVNMNGYTKGARNEIFALRPAPIQVMWLGYPGTS 697
                                  |.:.|.:..::..:.|...|.|..:::      :..||...::
plant   678 ----------------------KQWFDCVRSVIQQHPYRLNAWNCYYSV------ISRLGKRAST 714

  Fly   698 GASFMDYIITD---------------SVTS-PLELAYQYSEKLSYMPHTYFI------------- 733
            .|.||.::.:.               :||| ..:.|.:|.|....||.:..|             
plant   715 EAKFMHHLRSKYRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPESPLINLCVGAALINLAL 779

  Fly   734 -----GDHK---QMFPHLKERIIVCDKQQ-------------------SSVVDNVTVINATDLS- 770
                 ..|:   |.|..|...:.:|...|                   :|..:.|..|...|.: 
plant   780 GFRLKNRHECLAQGFAFLYNNLRICSNSQEALYNVARAYQHVGLVTLAASYYEKVLAIYEKDYTM 844

  Fly   771 PLVENTD--VKEIKEVVNAQKPVEITHKV 797
            |.:.|.|  |.|.::.||.....|..|.:
plant   845 PKLPNEDPIVAEERKPVNCDLRKEAAHNL 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sxcNP_523620.1 TPR repeat 53..78 CDD:276809
TPR 80..318 CDD:440225 50/268 (19%)
TPR repeat 86..112 CDD:276809 2/6 (33%)
TPR repeat 118..146 CDD:276809 6/39 (15%)
TPR repeat 151..181 CDD:276809 4/29 (14%)
LapB 219..486 CDD:442196 58/308 (19%)
TPR repeat 220..248 CDD:276809 8/27 (30%)
TPR repeat 255..282 CDD:276809 9/46 (20%)
TPR repeat 287..317 CDD:276809 7/38 (18%)
TPR repeat 322..350 CDD:276809 4/27 (15%)
TPR repeat 355..385 CDD:276809 2/29 (7%)
TPR repeat 390..418 CDD:276809 11/32 (34%)
TPR repeat 423..453 CDD:276809 4/29 (14%)
TPR repeat 458..486 CDD:276809 7/27 (26%)
Glyco_transf_41 505..1036 CDD:404688 72/384 (19%)
AT1G17680NP_173210.3 LapB <155..350 CDD:442196 38/202 (19%)
TPR repeat 156..181 CDD:276808 4/25 (16%)
TPR repeat 186..213 CDD:276808 6/26 (23%)
TPR repeat 224..249 CDD:276809 8/24 (33%)
TPR repeat 254..284 CDD:276809 5/29 (17%)
LapB 259..535 CDD:442196 57/316 (18%)
TPR repeat 289..317 CDD:276809 4/27 (15%)
TPR repeat 367..395 CDD:276809 6/53 (11%)
TPR repeat 398..426 CDD:276809 10/27 (37%)
TPR repeat 430..460 CDD:276809 4/29 (14%)
DnaG_DnaB_bind <611..666 CDD:447551 13/54 (24%)
Spy 745..>837 CDD:443119 14/91 (15%)
Blue background indicates that the domain is not in the aligned region.

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