DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sxc and SPY

DIOPT Version :10

Sequence 1:NP_523620.1 Gene:sxc / 35486 FlyBaseID:FBgn0261403 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_187761.1 Gene:SPY / 820327 AraportID:AT3G11540 Length:914 Species:Arabidopsis thaliana


Alignment Length:992 Identity:245/992 - (24%)
Similarity:393/992 - (39%) Gaps:202/992 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 KQNPVLAEAYSN--------------------------LGNVFKERGQLQEALDNYRRAVRLKPD 150
            :::||:...:||                          ..|:.:.|.:..:||..|...:.....
plant    11 ERSPVVENGFSNGSRSSSSSAGVLSPSRKVTQGNDTLSYANILRARNKFADALALYEAMLEKDSK 75

  Fly   151 FIDGYINLAAALVAARDMESAVQAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET 215
            .::.:|.....|........|...:..|::.:|...|..:..|.|.|..|||.||...|.||:..
plant    76 NVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMA 140

  Fly   216 CPGF-------AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRA 273
            ...:       |:..::||......|.....|..:.:|:.:||::..||.|||.|..|...:|.|
plant   141 DASYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNA 205

  Fly   274 VAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANAL------ 332
            ::.|.:|....|..|..:.|:..:|..:|.:::||..|.|.:.:.|||..|..|:|.||      
plant   206 LSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIALTDLGTK 270

  Fly   333 -KEKGQVKEAEDCYNTALRLCSNHADSLNNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNL 396
             |.:|.|.:....|..||....::||::.||.....|....:.|...|..|....|..|.|.:||
plant   271 VKLEGDVTQGVAYYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNL 335

  Fly   397 ASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAH 461
            ..:.:.:..|.:|:..|:.|:.|:|.||.:.:|:|........:..|.....:||..||.:|:|.
plant   336 GVLYKDRDNLDKAVECYQMALSIKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAF 400

  Fly   462 SNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDIRMKKLVSIVTEQL 526
            :||..:::|:|||..||.:|...||:.||..:|..|....:..:.:..|     .||.     :.
plant   401 NNLGVLYRDAGNITMAIDAYEECLKIDPDSRNAGQNRLLAMNYINEGLD-----DKLF-----EA 455

  Fly   527 EKN---RLPSVHPHHSMLYPLTHDCRKAIAARHANLCLEKVHVLHKKPYNFLKKLPTKGRLRIGY 588
            .::   |...:||.::     :.|          ||         |.|         :..:.|||
plant   456 HRDWGWRFTRLHPQYT-----SWD----------NL---------KDP---------ERPITIGY 487

  Fly   589 LSSDFGNHPTSHLMQSVPGLHDRSKVEIFCY-ALSPDDGTT--FRHKISRESENFVDLSQIPCNG 650
            :|.||..|..|:.:::....||.:|.::..| |:...|..|  ||.|:.::...:.|:..|. ..
plant   488 ISPDFFTHSVSYFIEAPLTHHDYTKYKVVVYSAVVKADAKTYRFRDKVLKKGGVWKDIYGID-EK 551

  Fly   651 KAADKIFNDGIHILVNMNGYTKGARNEIFALRPAPIQVMWLGYPGTSGASFMDYIITDSVTSPLE 715
            |.|..:..|.|.|||.:.|:|...:....|.||||:||.|:|||.|:|...:||.||||:..|.:
plant   552 KIASMVREDKIDILVELTGHTANNKLGTMACRPAPVQVTWIGYPNTTGLPTVDYRITDSLADPPD 616

  Fly   716 LAYQYSEKLSYMPHTYFIGDHKQMFPHLKERIIVCDKQQSSVVDNVTVINATDLSPLVENTDVKE 780
            ...:..|:|..:|..:                 :|                              
plant   617 TKQKQVEELVRLPDCF-----------------LC------------------------------ 634

  Fly   781 IKEVVNAQKPVEITHKVAELPNTTQIVSMIATGQVQTSLNGVVVQNGLATTQTNNKAATGEEVPQ 845
                   ..|......|...|                     .:.||..|               
plant   635 -------YTPSPEAGPVCPTP---------------------ALSNGFVT--------------- 656

  Fly   846 NIVITTRRQYMLPDDAVVYCNFNQLYKIDPQTLESWVEILKNVPKSVLWLLRFPAVGE---QNIK 907
                              :.:||.|.||.|:.|:.|..||..||.|.|.:...|...:   |...
plant   657 ------------------FGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSIRQRFL 703

  Fly   908 KTVSDFGISPDRV-IFSNVAAKEEHVRRGQLADICLDTPLCNGHTTSMDVLWTGTPVVTLPGETL 971
            .|:...|:...|| :...:....:|::...|.||.|||....|.||:.:.|:.|.|.||:.|...
plant   704 TTLEQLGLESKRVDLLPLILFNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVH 768

  Fly   972 ASRVAASQLATLGCPELIARTREEYQNIAIRLGTKKEYLKALRAKVWKARVESPLFDCSQYAKGL 1036
            |..|..|.|..:|...|:|:..:||..:::.|.:....|..||..:......||:.:...:|.||
plant   769 AHNVGVSLLTKVGLGHLVAKNEDEYVQLSVDLASDVTALSKLRMSLRDLMAGSPVCNGPSFAVGL 833

  Fly  1037 EKLFLRMWEKYENGELP 1053
            |..:..||:||..||:|
plant   834 ESAYRNMWKKYCKGEVP 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sxcNP_523620.1 TPR repeat 53..78 CDD:276809
TPR 80..318 CDD:440225 54/238 (23%)
TPR repeat 86..112 CDD:276809 245/992 (25%)
TPR repeat 118..146 CDD:276809 7/53 (13%)
TPR repeat 151..181 CDD:276809 4/29 (14%)
LapB 219..486 CDD:442196 81/280 (29%)
TPR repeat 220..248 CDD:276809 6/27 (22%)
TPR repeat 255..282 CDD:276809 11/26 (42%)
TPR repeat 287..317 CDD:276809 8/29 (28%)
TPR repeat 322..350 CDD:276809 10/34 (29%)
TPR repeat 355..385 CDD:276809 8/29 (28%)
TPR repeat 390..418 CDD:276809 8/27 (30%)
TPR repeat 423..453 CDD:276809 7/29 (24%)
TPR repeat 458..486 CDD:276809 11/27 (41%)
Glyco_transf_41 505..1036 CDD:404688 122/540 (23%)
SPYNP_187761.1 TPR repeat 47..71 CDD:276809 5/23 (22%)
TPR 50..>223 CDD:440225 43/172 (25%)
TPR repeat 76..106 CDD:276809 4/29 (14%)
TPR repeat 111..138 CDD:276809 11/26 (42%)
TPR repeat 152..180 CDD:276809 6/27 (22%)
LapB 158..427 CDD:442196 82/268 (31%)
TPR repeat 185..215 CDD:276809 11/29 (38%)
TPR repeat 220..248 CDD:276809 8/27 (30%)
TPR repeat 254..288 CDD:276809 9/33 (27%)
TPR repeat 295..323 CDD:276809 8/27 (30%)
Spy 311..845 CDD:443119 168/685 (25%)
TPR repeat 329..357 CDD:276809 8/27 (30%)
TPR repeat 362..392 CDD:276809 7/29 (24%)
TPR repeat 397..425 CDD:276809 11/27 (41%)
Blue background indicates that the domain is not in the aligned region.

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