DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sxc and SEC

DIOPT Version :9

Sequence 1:NP_523620.1 Gene:sxc / 35486 FlyBaseID:FBgn0261403 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_187074.1 Gene:SEC / 819579 AraportID:AT3G04240 Length:977 Species:Arabidopsis thaliana


Alignment Length:1041 Identity:414/1041 - (39%)
Similarity:588/1041 - (56%) Gaps:110/1041 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LDQNPNSTGSNLVVKQ-NDIQSLSSVGLLELAHREYQAVDYESAEKHCMQLWRQDSTNTGVLLLL 90
            ||.:.:|:.|:.:::| |..........|.|||:.|:..|::.|.:|...:::::...|..|||:
plant    29 LDLSVSSSSSSSLLQQFNKTHEGDDDARLALAHQLYKGGDFKQALEHSNMVYQRNPLRTDNLLLI 93

  Fly    91 SSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYSNLGNVFKERGQLQEALDNYRRAVRLKPDFIDGY 155
            .:|::|.:..|.....:..|::..|..||.|.|:.|.:||:|....|:..|..|:.|:|:|.|.:
plant    94 GAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAW 158

  Fly   156 INLAAALVAARDMESAVQAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETCPGFA 220
            .|||:|.:....:..|.|....||..||.|....|:||||:||.|.:.||.:|||:|:...|.||
plant   159 SNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFA 223

  Fly   221 VAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP 285
            :|||||..:|...|::..|:.::::||.|.|.|.|||:|||||.|.......|:..|..||.:.|
plant   224 IAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRP 288

  Fly   286 NNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALR 350
            |:|:..||:|.:|||||.:||||..|::|:...|.|.:||.||.||||:.|:|.||..|||..|.
plant   289 NSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLA 353

  Fly   351 LCSNHADSLNNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLKEALMHYKE 415
            |..||..::.||.||..|...:..|:.|:...|.|....:|..:|||.:.:|||...:|:..|.|
plant   354 LQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNE 418

  Fly   416 AIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQS 480
            .:||.|..|||..|.|||.||:..|:.|:|.|..||...|..|:||:||||.:||||::..||.|
plant   419 VLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAITS 483

  Fly   481 YRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDIRMKKLVSIVTEQLEKNRLPSVHPHHSMLYPLT 545
            |:.||.|:||||:|.|||.|.||.||.|.|......::.||:..|:..:.||||.|.|::.||:.
plant   484 YKQALLLRPDFPEATCNLLHTLQCVCCWEDRSKMFAEVESIIRRQINMSVLPSVQPFHAIAYPID 548

  Fly   546 HDCRKAIAARHANLCLEKVHVLHKKPYNFLKKLPTK-----GRLRIGYLSSDFGNHPTSHLMQSV 605
            ......|:.::|..|..........|:.....||.|     .||||||:||||||||.||||.||
plant   549 PILALEISRKYAAHCSIIASRFGLPPFTHPAGLPVKREGGFKRLRIGYVSSDFGNHPLSHLMGSV 613

  Fly   606 PGLHDRSKVEIFCYALSPDDGTTFRHKISRESENFVDLSQIPCNGKAADKIFN-DGIHILVNMNG 669
            .|:|:|..||:||||||.:|.|.:|.:|..|:|:|:|:|.:  :..|..||.| |.|.||:|:||
plant   614 FGMHNRENVEVFCYALSANDNTEWRQRIQSEAEHFLDVSAM--SSDAIAKIINQDKIQILINLNG 676

  Fly   670 YTKGARNEIFALRPAPIQVMWLGYPGTSGASFMDYIITDSVTSPLELAYQYSEKLSYMPHTYFIG 734
            |||||||||||::||||||.::|:|||:||:::||::||...|||:.|:.|||||.::||.||:.
plant   677 YTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSPLQYAHIYSEKLVHLPHCYFVN 741

  Fly   735 DHKQMFPHLKERIIVCDKQQSSVVDNVTVINATDLSPLVENTDVKEIKEVVNAQKPVEITHKVAE 799
            |:||                                   :|.||.:                   
plant   742 DYKQ-----------------------------------KNQDVLD------------------- 752

  Fly   800 LPNTTQIVSMIATGQVQTSLNGVVVQNGLATTQTNNKAATGEEVPQNIVITTRRQYMLPDDAVVY 864
             ||:.                                       |:      |..|.||:|..::
plant   753 -PNSK---------------------------------------PK------RSDYGLPEDKFIF 771

  Fly   865 CNFNQLYKIDPQTLESWVEILKNVPKSVLWLLRFPAVGEQNIKKTVSDFGISPDRVIFSNVAAKE 929
            ..||||||:||:.:.:|..|||.||.|.||||||||.||...:...:..|:.||::||::||.|.
plant   772 ACFNQLYKMDPEIVNTWCNILKRVPNSALWLLRFPAAGEMRFRTYAAAQGVQPDQIIFTDVAMKS 836

  Fly   930 EHVRRGQLADICLDTPLCNGHTTSMDVLWTGTPVVTLPGETLASRVAASQLATLGCPE-LIARTR 993
            ||:||..|||:.|||||||||||..||||.|.|::|||.|.:|:|||.|.....|... :|..:.
plant   837 EHIRRSVLADVILDTPLCNGHTTGTDVLWAGVPMITLPLEKMATRVAGSLCLATGLGHGMIVNSL 901

  Fly   994 EEYQNIAIRLGTKKEYLKALRAKVWKARVESPLFDCSQYAKGLEKLFLRMWEKYENGELPDHISA 1058
            |||:..|:.|...|..|:||..::..:|:..||||..::.|.||:.:.:||..:.:|:.|.|...
plant   902 EEYEEKAVSLALNKPKLQALTKELRASRLTCPLFDTMRWVKNLERSYFKMWNLHCSGQQPQHFKV 966

  Fly  1059 V 1059
            :
plant   967 L 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sxcNP_523620.1 TPR repeat 53..78 CDD:276809 8/24 (33%)
TPR_11 86..149 CDD:290150 20/62 (32%)
TPR repeat 86..112 CDD:276809 7/25 (28%)
TPR_11 118..183 CDD:290150 23/64 (36%)
TPR_1 118..151 CDD:278916 13/32 (41%)
TPR repeat 118..146 CDD:276809 11/27 (41%)
TPR repeat 151..181 CDD:276809 10/29 (34%)
TPR_12 182..252 CDD:290160 31/69 (45%)
TPR_1 192..219 CDD:278916 14/26 (54%)
TPR_1 220..253 CDD:278916 13/32 (41%)
TPR repeat 220..248 CDD:276809 10/27 (37%)
TPR 233..490 CDD:223533 114/256 (45%)
TPR_1 255..287 CDD:278916 14/31 (45%)
TPR repeat 255..282 CDD:276809 12/26 (46%)
TPR repeat 287..317 CDD:276809 15/29 (52%)
TPR_1 288..321 CDD:278916 16/32 (50%)
TPR_17 310..342 CDD:290167 15/31 (48%)
TPR repeat 322..350 CDD:276809 15/27 (56%)
TPR repeat 355..385 CDD:276809 9/29 (31%)
TPR_10 356..>385 CDD:290111 8/28 (29%)
TPR_1 390..423 CDD:278916 13/32 (41%)
TPR repeat 390..418 CDD:276809 10/27 (37%)
TPR repeat 423..453 CDD:276809 15/29 (52%)
TPR_1 424..455 CDD:278916 15/30 (50%)
TPR_1 458..491 CDD:278916 19/32 (59%)
TPR repeat 458..486 CDD:276809 16/27 (59%)
Glyco_transf_41 584..1044 CDD:290556 189/461 (41%)
SECNP_187074.1 PEP_TPR_lipo <54..487 CDD:274350 177/432 (41%)
TPR repeat 54..81 CDD:276809 8/26 (31%)
TPR repeat 90..115 CDD:276809 7/24 (29%)
TPR repeat 121..149 CDD:276809 11/27 (41%)
TPR repeat 154..184 CDD:276809 10/29 (34%)
TPR repeat 189..217 CDD:276809 14/27 (52%)
TPR repeat 223..251 CDD:276809 10/27 (37%)
TPR repeat 257..285 CDD:276809 12/27 (44%)
TPR repeat 290..320 CDD:276809 15/29 (52%)
TPR repeat 325..353 CDD:276809 15/27 (56%)
TPR repeat 359..383 CDD:276809 7/23 (30%)
TPR repeat 396..421 CDD:276809 9/24 (38%)
TPR repeat 426..456 CDD:276809 15/29 (52%)
TPR repeat 461..488 CDD:276809 15/26 (58%)
Glycosyltransferase_GTB-type 508..944 CDD:415824 210/537 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 42 1.000 Domainoid score I4805
eggNOG 1 0.900 - - E1_COG3914
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9675
Inparanoid 1 1.050 788 1.000 Inparanoid score I93
OMA 1 1.010 - - QHG58402
OrthoDB 1 1.010 - - D142546at2759
OrthoFinder 1 1.000 - - FOG0006462
OrthoInspector 1 1.000 - - oto4008
orthoMCL 1 0.900 - - OOG6_100604
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4712
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.740

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