DRSC/TRiP Functional Genomics Resources

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Protein Alignment sxc and Ttc6

DIOPT Version :10

Sequence 1:NP_523620.1 Gene:sxc / 35486 FlyBaseID:FBgn0261403 Length:1059 Species:Drosophila melanogaster
Sequence 2:NP_001299573.1 Gene:Ttc6 / 70846 MGIID:2684915 Length:1857 Species:Mus musculus


Alignment Length:641 Identity:131/641 - (20%)
Similarity:240/641 - (37%) Gaps:167/641 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VEQTR-INMQSQGQSHQLPSAAHILLDQNPNSTGSNLVVKQNDIQSLS-------SVGLLELAHR 59
            :|.|| |::|        |.|.|:.:.:..    ..|::|..|:...:       :.|::|::..
Mouse  1216 IELTRAIHLQ--------PDAIHLYIMRGQ----FLLMMKSYDLAKFTIYQVAEMNKGIIEMSPI 1268

  Fly    60 EYQAVDYESAEKHCMQLWRQDST-----NTGVLLLLSSIHFQCRRLDKSAQFSTLAIK------Q 113
            : :|:.|...|.|...:...:..     :.....||:....:.:|:.:|.:....|::      :
Mouse  1269 Q-EALIYSFCENHDKAIHILEGVIASKPDISTYALLAKAQMKAKRIKESVRLFKKALELYTFSDK 1332

  Fly   114 NPVL----AEAYSNLGNVFKERGQLQEALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAV-- 172
            .||.    ||...|||..:.|.|..|.|.:::.:||:..|:|.:.:.:.....|......|.:  
Mouse  1333 GPVATSVSAECLYNLGLCYMEEGNFQMAFESFTKAVKANPEFAEAFYHRGLCKVKLNKQNSILDF 1397

  Fly   173 -----------QAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET--CPGFA---- 220
                       |||::.:.|    |.::   |...||:....||...|.:::..  |.|..    
Mouse  1398 NRALTLNPKHYQAYLSRVAY----YGLK---GRYSKAILNCNEAIKLYPESVRAYICRGVLKYYN 1455

  Fly   221 ---------------------VAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN---FLDAYINLG 261
                                 .|:.|....:...||..:|:..:...:.||..   .|:..||.|
Mouse  1456 RTYKLGITDLSTAIKMDKNNYTAYYNRALCYTKIGEHQMALRDYGIVLLLDAGENIALNTLINRG 1520

  Fly   262 NVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYC 326
            .:..|.:.:..|:..:.:|..:|..:..:....|..::.....:.|::.:.|||::.|::.|||.
Mouse  1521 LIYTELKQYGFALEDFKQAALMSGTSVSLCQATATCHHRIKEFEGAVEFFTRAIKINPHYVDAYI 1585

  Fly   327 NLANALKEKGQVKEAEDCYNTALRLCSNHADSLNNLANIKREQGYIEEATRLYLKALEVFPDFAA 391
            ...|:..|..|    ||.                           :.:|.:.:||||.:.|....
Mouse  1586 GRGNSYMEYSQ----EDA---------------------------MIQAQKDFLKALHLDPSCLK 1619

  Fly   392 AHSNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYS-------NMGNTLKELQDVSGALQC--- 446
            |..:|...||.|||.::|.:|:...|...|....||.       .|.|....:||::.|::.   
Mouse  1620 ARISLGYNLQAQGKFQKAWIHFTVGIESNPKSYLAYEGRAVVCLQMSNYFAAMQDINCAIKINST 1684

  Fly   447 -----------------------YTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK 488
                                   |..||.:||:::.|:.|..:|:.......:|...:.||||..
Mouse  1685 AEFLTNRGVIHEFMGQQQSAMADYQAAISLNPSYSLAYFNAGNIYLHHRQFSQASDYFSTALKFN 1749

  Fly   489 PDFPDAYCNLAHCLQIVCDWTDYDIRMKKLVSIVTEQLEKNRLPSVH--PHHSMLY 542
            |:...|..|.|....:          :||.     |:.||:...::.  ||.:.||
Mouse  1750 PENEYALMNRAVTNSV----------LKKY-----EEAEKDFSCAMERCPHWAALY 1790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sxcNP_523620.1 TPR repeat 53..78 CDD:276809 5/24 (21%)
TPR 80..318 CDD:440225 55/295 (19%)
TPR repeat 86..112 CDD:276809 5/25 (20%)
TPR repeat 118..146 CDD:276809 10/27 (37%)
TPR repeat 151..181 CDD:276809 6/42 (14%)
LapB 219..486 CDD:442196 64/327 (20%)
TPR repeat 220..248 CDD:276809 5/52 (10%)
TPR repeat 255..282 CDD:276809 6/26 (23%)
TPR repeat 287..317 CDD:276809 5/29 (17%)
TPR repeat 322..350 CDD:276809 8/27 (30%)
TPR repeat 355..385 CDD:276809 5/29 (17%)
TPR repeat 390..418 CDD:276809 9/27 (33%)
TPR repeat 423..453 CDD:276809 10/62 (16%)
TPR repeat 458..486 CDD:276809 6/27 (22%)
Glyco_transf_41 505..1036 CDD:404688 9/40 (23%)
Ttc6NP_001299573.1 PTZ00436 <13..178 CDD:185616
TPR repeat 889..917 CDD:276809
PEP_TPR_lipo 896..1760 CDD:274350 121/594 (20%)
TPR repeat 922..952 CDD:276809
TPR repeat 957..984 CDD:276809
TPR repeat 990..1017 CDD:276809
TPR repeat 1023..1051 CDD:276809
TPR repeat 1056..1086 CDD:276809
TPR repeat 1162..1189 CDD:276809
TPR repeat 1194..1224 CDD:276809 4/7 (57%)
TPR repeat 1229..1257 CDD:276809 4/31 (13%)
TPR repeat 1268..1292 CDD:276809 4/24 (17%)
TPR repeat 1299..1325 CDD:276809 5/25 (20%)
TPR repeat 1341..1369 CDD:276809 10/27 (37%)
TPR repeat 1374..1403 CDD:276809 3/28 (11%)
TadD <1398..1506 CDD:444034 18/114 (16%)
TPR repeat 1408..1436 CDD:276809 10/34 (29%)
TPR repeat 1441..1471 CDD:276809 2/29 (7%)
TPR repeat 1476..1499 CDD:276809 5/22 (23%)
TPR repeat 1515..1541 CDD:276809 6/25 (24%)
TPR repeat 1546..1576 CDD:276809 5/29 (17%)
TPR repeat 1581..1611 CDD:276809 11/60 (18%)
TPR repeat 1619..1646 CDD:276809 9/26 (35%)
TPR repeat 1651..1681 CDD:276809 7/29 (24%)
TPR 1685..>1852 CDD:440225 26/121 (21%)
TPR repeat 1685..1713 CDD:276809 2/27 (7%)
TPR repeat 1718..1748 CDD:276809 7/29 (24%)
TPR repeat 1753..1781 CDD:276809 8/42 (19%)
TPR repeat 1787..1810 CDD:276809 2/4 (50%)
TPR repeat 1821..1849 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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