Protein Alignment d4 and MBD9

DIOPT Version :10

• Sequence 1: NP_610163.1
• Gene: d4 / 35485
• FlyBaseID: FBgn0033015
• Length: 497
• Species: Drosophila melanogaster
• Sequence 2: NP_186795.1
• Gene: MBD9 / 821132
• AraportID: AT3G01460
• Length: 2176
• Species: Arabidopsis thaliana
• Alignment Length: 559
• Identity: 107/559 - (19%)
• Similarity: 162/559 - (28%)
• Gaps: 223/559 - (39%)

  Fly   140 PQNPHLAESAAIAATDGNSMGASGDNDSKDSHANVEKEWFHDEMDTSHFHHGDEFEDDFDSDN-- 202
            |:|  |.:.......||..:...|.:|.:......:|    |...|..|...||....|.:.|
plant   792 PEN--LEQELINPVFDGLFLDKPGKDDKRSEINFTDK----DSTATKLFSLFDESRQPFPAKNTS 850

  Fly   203 -------------DFDESYTSRGKRKKCSRPRRTNANV-------------------------EG 229
                         ||..|.:|||   .|.....|.|::                         |.
plant   851 ASELKEKKAGDSSDFKISDSSRG---SCVGALLTRAHISLLQVLICELQSKVAAFVDPNFDSGES 912

  Fly   230 TPKRGRKG-----GGNRRK--------------------------NAVEGESDRKRRAG------ 257
            ..:||||.     ...|.|                          ..:|......|.:|
plant   913 RSRRGRKKDDSTLSAKRNKLHMLPVNEFTWPELARRYILSLLSMDGNLESAEIAARESGKVFRCL 977

  Fly   258 -GNSANTSAAAAAAAAAVAHAACTAAAVAS-TGLYASHSNSASPIPINDDNSQ----------SG 310
             |:......:....|...|.:...|.|:.. :|...|.::..|   :.||:|.          ||
plant   978 QGDGGLLCGSLTGVAGMEADSMLLAEAIKKISGSLTSENDVLS---VEDDDSDGLDATETNTCSG 1039

  Fly   311 LI------------LPTNISSSYDK---------------------TSSDAGASNDSIP-----L 337
            .|            ||||:.:...|                     .|.:....|.|.|     |
plant  1040 DIPEWAQVLEPVKKLPTNVGTRIRKCVYEALERNPPEWAKKILEHSISKEIYKGNASGPTKKAVL 1104

  Fly   338 ATMVAINAG---------------LTTSNV----CNA--HPVQTGTNQTVFAT--GNKVKQRVER 379
            :.:..|..|               ::.|:|    |.|  ..|.......|..|  |.|:....:.
plant  1105 SLLADIRGGDLVQRSIKGTKKRTYISVSDVIMKKCRAVLRGVAAADEDKVLCTLLGRKLLNSSDN 1169

  Fly   380 D----------IAQPSPYCDFCLGDQR------ENKKTNMPEELVSCSDCGR---SGHPSCLQFT 425
            |          :::|   .||...|.|      :.......|:::......|   :..|.|:...
plant  1170 DDDGLLGSPAMVSRP---LDFRTIDLRLAAGAYDGSTEAFLEDVLELWSSIRVMYADQPDCVDLV 1231

  Fly   426 AN---------------MIISVKRYR-WQCIECK-----------------------YCSICGTS 451
            |.               ::..:|.|| .:|:..:                       .|.:||..
plant  1232 ATLSEKFKSLYEAEVVPLVQKLKDYRKLECLSAEMKKEIKDIVVSVNKLPKAPWDEGVCKVCGVD 1296

  Fly   452 DNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCM 490
            .:||.:|.||.||..||.|||:|||:..|:|:|.|..|:
plant  1297 KDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCV 1335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
d4	NP_610163.1	DPF1-3_N	31..93	CDD:464074
		PHD1_d4	387..442	CDD:277091	13/79 (16%)
		PHD2_d4	444..489	CDD:277005	22/44 (50%)
MBD9	NP_186795.1	PHD_SF	86..130	CDD:473978
		MBD	258..>311	CDD:396147
		FYRN	413..453	CDD:470644
		FYRC	<671..695	CDD:470645
		PHD1_Lid2p_like	1289..1334	CDD:276994	22/44 (50%)
		BAH	1312..>1390	CDD:470629	13/24 (54%)