DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment d4 and Dpf3

DIOPT Version :9

Sequence 1:NP_610163.1 Gene:d4 / 35485 FlyBaseID:FBgn0033015 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_001254554.1 Gene:Dpf3 / 70127 MGIID:1917377 Length:378 Species:Mus musculus


Alignment Length:475 Identity:164/475 - (34%)
Similarity:223/475 - (46%) Gaps:140/475 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQIYTYPSSRWRK 95
            |||.:|:..::|:|||.||.:|:||||.||||||.:|.::|:|:.|.|||..||:||||:..|||
Mouse    17 YKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRK 81

  Fly    96 PKRQYLLNP--NQSFRAYQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAI-AATDGN 157
            .:|   |:|  :...|..:.:                  |...:.:.::...:||..: |...|.
Mouse    82 KRR---LHPPEDPKLRLLEIK------------------PEVELPLKKDGFTSESTTLEALLRGE 125

  Fly   158 SMGASGDNDSKDSHANVEKEWFHDEMDTSHFHHGDEFEDDFDSDNDFDESYTSRGKRKKCSRPRR 222
            .:....|...::|...:::...:||    :...|:| |:|.:.|..         |||..:|.| 
Mouse   126 GVEKKVDAREEESIQEIQRVLENDE----NVEEGNE-EEDLEEDVP---------KRKNRTRGR- 175

  Fly   223 TNANVEGTPKRGRKGGGNRRKNAVEGESDR-----------KRRAGGNSANTSAAAAAAAAAVAH 276
                     .||..||..|...|.:.:.|:           |.|.|                   
Mouse   176 ---------ARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPG------------------- 212

  Fly   277 AACTAAAVASTGLYASHSNSASPIPINDDNSQSGLILPTNISSSYDKTSSDAGASNDSIPLATMV 341
                      ...:.:|::.||.   ..|.:|.            .:|.|.....|::       
Mouse   213 ----------LSYHYAHTHLASE---EGDEAQD------------QETRSPPNHRNEN------- 245

  Fly   342 AINAGLTTSNVCNAHPVQTGTNQTVFATGNKVKQRVERDIAQPSPYCDFCLGDQRENKKTNMPEE 406
                          |..|.|.:.||.                |:.|||||||....|||:..|||
Mouse   246 --------------HRPQKGPDGTVI----------------PNNYCDFCLGGSNMNKKSGRPEE 280

  Fly   407 LVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYC 471
            ||||:||||||||:|||||.||..:||.|:|||||||.|.:||||:|||||||||||||||||||
Mouse   281 LVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYC 345

  Fly   472 LSPPLVTPPEGSWSCKLCME 491
            |:||:..||||||||.||.|
Mouse   346 LNPPVAEPPEGSWSCHLCWE 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
d4NP_610163.1 Requiem_N 30..98 CDD:290758 37/66 (56%)
PHD1_d4 387..442 CDD:277091 39/54 (72%)
PHD2_d4 444..489 CDD:277005 35/44 (80%)
Dpf3NP_001254554.1 Requiem_N 13..84 CDD:372894 37/66 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..193 18/70 (26%)
SFP1 <195..222 CDD:227516 5/55 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 225..254 8/64 (13%)
PHD1_DPF3 261..317 CDD:277162 40/55 (73%)
PHD2_d4 318..363 CDD:277005 35/44 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846917
Domainoid 1 1.000 101 1.000 Domainoid score I6910
eggNOG 1 0.900 - - E1_KOG1244
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 299 1.000 Inparanoid score I2682
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49768
OrthoDB 1 1.010 - - D312433at33208
OrthoFinder 1 1.000 - - FOG0001297
OrthoInspector 1 1.000 - - otm42647
orthoMCL 1 0.900 - - OOG6_105541
Panther 1 1.100 - - LDO PTHR10615
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5121
SonicParanoid 1 1.000 - - X895
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.890

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