DRSC/TRiP Functional Genomics Resources

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Protein Alignment d4 and phf10

DIOPT Version :10

Sequence 1:NP_610163.1 Gene:d4 / 35485 FlyBaseID:FBgn0033015 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_956949.3 Gene:phf10 / 393628 ZFINID:ZDB-GENE-040426-1573 Length:490 Species:Danio rerio


Alignment Length:476 Identity:102/476 - (21%)
Similarity:153/476 - (32%) Gaps:197/476 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KIQNFLNDKEKYKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQ 84
            |:..::  |:..|:..|.:.|||.....|||   .:.|.||.:.|               :..|:
Zfish   192 KVPEYI--KKAAKKAAEFNSNFNRERMEERR---AYFDLQTHIIQ---------------VPQGK 236

  Fly    85 IYTYPSSRWRKPKRQYLLNPNQSFRAY--QYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAE 147
            ....|..|.:.......|.|.| |:.|  :|..:.|::                  :|.|..|.|
Zfish   237 YKILPPERTKTGPFPVALIPGQ-FQEYYKRYSPNELRY------------------LPLNTALFE 282

  Fly   148 SAAIAATDGNSMGASGDNDSKDSHANVEKEWFHDEMDTSHFHHGDEFEDDFDSDNDFDESYTSRG 212
                ...|........|.||.|                     ||:.::|              |
Zfish   283 ----PPLDPELPALDSDGDSDD---------------------GDDGKED--------------G 308

  Fly   213 KRKKCSRPRRTNANVEGTPKRGRKGGGNRRKNAVEGESDRKRRAGGNSANTSAAAAAAAAAVAHA 277
            |:.|                               |.||      .:|.|||             
Zfish   309 KKNK-------------------------------GSSD------SSSGNTS------------- 323

  Fly   278 ACTAAAVASTGLYASHSNSASPIPINDDNSQSGLILPTNISSSYDKTSSDAGA-SNDSIPLATMV 341
                                     :.|:..||:       .|..|:....|| |.|..|.:.. 
Zfish   324 -------------------------DGDSQDSGI-------HSKVKSKDRPGAQSKDGTPRSIQ- 355

  Fly   342 AINAGLTTSNVCNAHPVQTGTNQTVFATGNKVKQRVERDIAQPSPYCDFCLGDQRENKKTNMPEE 406
                          |....|....|.                |:..|..|...:..||: ..||.
Zfish   356 --------------HKSVPGYKPKVI----------------PNAICGICQKGKEANKR-GKPEA 389

  Fly   407 LVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYC 471
            |:.||.|..|||||||..:.:::..:|.|.|||:|||.|::|....::::::|||.||||:|.:|
Zfish   390 LIHCSQCQNSGHPSCLDMSVDLVAKIKMYPWQCMECKTCTVCQQPHHEEEMMFCDKCDRGFHTFC 454

  Fly   472 LSPPLVTPPEGSWSCKLCMEE 492
            :....:  |.|.|.|.||.::
Zfish   455 VGMDSI--PMGCWVCDLCSKD 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
d4NP_610163.1 DPF1-3_N 31..93 CDD:464074 14/61 (23%)
PHD1_d4 387..442 CDD:277091 22/54 (41%)
PHD2_d4 444..489 CDD:277005 15/44 (34%)
phf10NP_956949.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
WH_NTD_PHF10 67..155 CDD:411035
SAY 83..292 29/142 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..362 29/209 (14%)
PHD1_PHF10 371..425 CDD:277003 22/54 (41%)
PHD2_PHF10 427..470 CDD:277004 15/44 (34%)
Blue background indicates that the domain is not in the aligned region.

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