DRSC/TRiP Functional Genomics Resources

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Protein Alignment d4 and phf10

DIOPT Version :9

Sequence 1:NP_610163.1 Gene:d4 / 35485 FlyBaseID:FBgn0033015 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_956949.3 Gene:phf10 / 393628 ZFINID:ZDB-GENE-040426-1573 Length:490 Species:Danio rerio


Alignment Length:476 Identity:102/476 - (21%)
Similarity:153/476 - (32%) Gaps:197/476 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KIQNFLNDKEKYKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQ 84
            |:..::  |:..|:..|.:.|||.....|||   .:.|.||.:.|               :..|:
Zfish   192 KVPEYI--KKAAKKAAEFNSNFNRERMEERR---AYFDLQTHIIQ---------------VPQGK 236

  Fly    85 IYTYPSSRWRKPKRQYLLNPNQSFRAY--QYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAE 147
            ....|..|.:.......|.|.| |:.|  :|..:.|::                  :|.|..|.|
Zfish   237 YKILPPERTKTGPFPVALIPGQ-FQEYYKRYSPNELRY------------------LPLNTALFE 282

  Fly   148 SAAIAATDGNSMGASGDNDSKDSHANVEKEWFHDEMDTSHFHHGDEFEDDFDSDNDFDESYTSRG 212
                ...|........|.||.|                     ||:.::|              |
Zfish   283 ----PPLDPELPALDSDGDSDD---------------------GDDGKED--------------G 308

  Fly   213 KRKKCSRPRRTNANVEGTPKRGRKGGGNRRKNAVEGESDRKRRAGGNSANTSAAAAAAAAAVAHA 277
            |:.|                               |.||      .:|.|||             
Zfish   309 KKNK-------------------------------GSSD------SSSGNTS------------- 323

  Fly   278 ACTAAAVASTGLYASHSNSASPIPINDDNSQSGLILPTNISSSYDKTSSDAGA-SNDSIPLATMV 341
                                     :.|:..||:       .|..|:....|| |.|..|.:.. 
Zfish   324 -------------------------DGDSQDSGI-------HSKVKSKDRPGAQSKDGTPRSIQ- 355

  Fly   342 AINAGLTTSNVCNAHPVQTGTNQTVFATGNKVKQRVERDIAQPSPYCDFCLGDQRENKKTNMPEE 406
                          |....|....|.                |:..|..|...:..||: ..||.
Zfish   356 --------------HKSVPGYKPKVI----------------PNAICGICQKGKEANKR-GKPEA 389

  Fly   407 LVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYC 471
            |:.||.|..|||||||..:.:::..:|.|.|||:|||.|::|....::::::|||.||||:|.:|
Zfish   390 LIHCSQCQNSGHPSCLDMSVDLVAKIKMYPWQCMECKTCTVCQQPHHEEEMMFCDKCDRGFHTFC 454

  Fly   472 LSPPLVTPPEGSWSCKLCMEE 492
            :....:  |.|.|.|.||.::
Zfish   455 VGMDSI--PMGCWVCDLCSKD 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
d4NP_610163.1 Requiem_N 30..98 CDD:290758 15/67 (22%)
PHD1_d4 387..442 CDD:277091 22/54 (41%)
PHD2_d4 444..489 CDD:277005 15/44 (34%)
phf10NP_956949.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
SAY 83..292 29/142 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..362 29/209 (14%)
PHD1_PHF10 371..425 CDD:277003 22/54 (41%)
PHD2_PHF10 427..470 CDD:277004 15/44 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312433at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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