Protein Alignment d4 and Kdm5

DIOPT Version :10

• Sequence 1: NP_610163.1
• Gene: d4 / 35485
• FlyBaseID: FBgn0033015
• Length: 497
• Species: Drosophila melanogaster
• Sequence 2: NP_523486.1
• Gene: Kdm5 / 33837
• FlyBaseID: FBgn0031759
• Length: 1838
• Species: Drosophila melanogaster
• Alignment Length: 297
• Identity: 60/297 - (20%)
• Similarity: 94/297 - (31%)
• Gaps: 120/297 - (40%)

  Fly   206 ESYTSRGKRKKCSRPRRTNANVEGTPKRGRKGGG---------NRRKNAVEGESD-RKRRAGGNS 260
            |.|||    .|...|..|::....||.:...|||         .|::.|...|:: |:.:..|||
  Fly   312 EVYTS----GKVLGPTPTSSGSGSTPVKLEDGGGTDYKAHEIPTRQQIAPPNETNTRRSKRFGNS 372

  Fly   261 ANTSAAAAAAAAAVAHAACTAAAVASTGLYASHSNSASPIPINDDNSQSGLILPTNISSSYDKTS 325
                           :|:|..:.|..|                 ....:|:.:.|.....:.:..
  Fly   373 ---------------NASCGLSGVTPT-----------------TKPSAGVFVKTETKEEFKRDL 405

  Fly   326 SDAGASNDSIPLATMVAINAGLTTSNVCNAHPVQTGTNQTVFATGNKVKQRVERDIAQPSPYCDF 390
                       |::..|:|:|        ..|:.|||.........|
  Fly   406 -----------LSSFNAVNSG--------GSPLATGTTANTRGASQK------------------ 433

  Fly   391 CLGDQRENKKTNMPEELVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDD 455
                                    :.|.|..|     ::..:.:|        .|.||...|.::
  Fly   434 ------------------------KGGEPPAL-----IVDPLMKY--------ICHICNRGDVEE 461

  Fly   456 QLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCMEE 492
            .:|.||.||..||.:||.|||.:.|:|.|.|..|:.|
  Fly   462 SMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVE 498

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
d4	NP_610163.1	DPF1-3_N	31..93	CDD:464074
		PHD1_d4	387..442	CDD:277091	4/54 (7%)
		PHD2_d4	444..489	CDD:277005	20/44 (45%)
Kdm5	NP_523486.1	JmjN	160..201	CDD:128818
		ARID_JARID	226..312	CDD:350628	60/297 (20%)
		PHD1_Lid_like	450..495	CDD:277078	20/44 (45%)
		JmjC	624..740	CDD:396791
		zf-C5HC2	830..882	CDD:460750
		PLU-1	896..1231	CDD:462475
		PHD2_KDM5A	1295..1351	CDD:277079
		PHD3_KDM5A_like	1755..1805	CDD:277083