DRSC/TRiP Functional Genomics Resources

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Protein Alignment d4 and Dpf3

DIOPT Version :9

Sequence 1:NP_610163.1 Gene:d4 / 35485 FlyBaseID:FBgn0033015 Length:497 Species:Drosophila melanogaster
Sequence 2:XP_008762968.1 Gene:Dpf3 / 299186 RGDID:1309052 Length:401 Species:Rattus norvegicus


Alignment Length:475 Identity:164/475 - (34%)
Similarity:223/475 - (46%) Gaps:140/475 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQIYTYPSSRWRK 95
            |||.:|:..::|:|||.||.:|:||||.||||||.:|.::|:|:.|.|||..||:||||:..|||
  Rat    40 YKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQLYTYPARCWRK 104

  Fly    96 PKRQYLLNP--NQSFRAYQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAAI-AATDGN 157
            .:|   |:|  :...|..:.:                  |...:.:.::...:||..: |...|.
  Rat   105 KRR---LHPPEDPKLRLLEIK------------------PEVELPLKKDGFTSESTTLEALLRGE 148

  Fly   158 SMGASGDNDSKDSHANVEKEWFHDEMDTSHFHHGDEFEDDFDSDNDFDESYTSRGKRKKCSRPRR 222
            .:....|...::|...:::...:||    :...|:| |:|.:.|..         |||..:|.| 
  Rat   149 GVEKKVDAREEESIQEIQRVLENDE----NVEEGNE-EEDLEEDIP---------KRKNRTRGR- 198

  Fly   223 TNANVEGTPKRGRKGGGNRRKNAVEGESDR-----------KRRAGGNSANTSAAAAAAAAAVAH 276
                     .||..||..|...|.:.:.|:           |.|.|                   
  Rat   199 ---------ARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPG------------------- 235

  Fly   277 AACTAAAVASTGLYASHSNSASPIPINDDNSQSGLILPTNISSSYDKTSSDAGASNDSIPLATMV 341
                      ...:.:|::.||.   ..|.:|.            .:|.|.....|::       
  Rat   236 ----------LSYHYAHTHLASE---EGDEAQD------------QETRSPPNHRNEN------- 268

  Fly   342 AINAGLTTSNVCNAHPVQTGTNQTVFATGNKVKQRVERDIAQPSPYCDFCLGDQRENKKTNMPEE 406
                          |..|.|.:.||.                |:.|||||||....|||:..|||
  Rat   269 --------------HRPQKGPDGTVI----------------PNNYCDFCLGGSNMNKKSGRPEE 303

  Fly   407 LVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYC 471
            ||||:||||||||:|||||.||..:||.|:|||||||.|.:||||:|||||||||||||||||||
  Rat   304 LVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYC 368

  Fly   472 LSPPLVTPPEGSWSCKLCME 491
            |:||:..||||||||.||.|
  Rat   369 LNPPVAEPPEGSWSCHLCWE 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
d4NP_610163.1 Requiem_N 30..98 CDD:290758 37/66 (56%)
PHD1_d4 387..442 CDD:277091 39/54 (72%)
PHD2_d4 444..489 CDD:277005 35/44 (80%)
Dpf3XP_008762968.1 Requiem_N 36..107 CDD:290758 37/66 (56%)
PHD1_DPF3 284..340 CDD:277162 40/55 (73%)
PHD2_d4 341..386 CDD:277005 35/44 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350418
Domainoid 1 1.000 92 1.000 Domainoid score I7406
eggNOG 1 0.900 - - E1_KOG1244
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 278 1.000 Inparanoid score I2850
OMA 1 1.010 - - QHG49768
OrthoDB 1 1.010 - - D312433at33208
OrthoFinder 1 1.000 - - FOG0001297
OrthoInspector 1 1.000 - - otm44713
orthoMCL 1 0.900 - - OOG6_105541
Panther 1 1.100 - - LDO PTHR10615
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X895
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.900

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