DRSC/TRiP Functional Genomics Resources

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Protein Alignment d4 and Phf10

DIOPT Version :9

Sequence 1:NP_610163.1 Gene:d4 / 35485 FlyBaseID:FBgn0033015 Length:497 Species:Drosophila melanogaster
Sequence 2:XP_017444365.2 Gene:Phf10 / 292404 RGDID:1305266 Length:556 Species:Rattus norvegicus


Alignment Length:473 Identity:108/473 - (22%)
Similarity:151/473 - (31%) Gaps:192/473 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KIQNFLNDKEKYKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQ 84
            |:..::  |:..|:..|.:.|.|.....|||   .:.|.||.|.|               :..|:
  Rat   253 KVPEYI--KKAAKKAAEFNSNLNRERMEERR---AYFDLQTHVIQ---------------VPQGK 297

  Fly    85 IYTYPSSRWRKPKRQYLLNPNQSFRAYQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESA 149
            ....|:.|.:.......|.|.| |:.| |:.::               |.....:|.|..|.|..
  Rat   298 YKVLPTDRTKVSSYPVALIPGQ-FQEY-YKRYS---------------PDELRYLPLNTALYEPP 345

  Fly   150 AIAATDGNSMGASGDNDSKDSHANVEKEWFHDEMDTSHFHHGDEFEDDFDSDNDFDESYTSRGKR 214
            .                                         |......|||.|.|:        
  Rat   346 L-----------------------------------------DPELPALDSDGDSDD-------- 361

  Fly   215 KKCSRPRRTNANVEGTPKRGRKGGGNRRKNAVEGESDRKRRAGGNSANTSAAAAAAAAAVAHAAC 279
                               |..|||           |.||:..|.|.::|               
  Rat   362 -------------------GEDGGG-----------DEKRKNKGTSDSSS--------------- 381

  Fly   280 TAAAVASTGLYASHSNSASPIPINDDNSQSGLILPTNISSSYDKTSSDAGASNDSIPLATMVAIN 344
                       .:.|...||....:|..|..       ..|.||             :||     
  Rat   382 -----------GNVSEGDSPPDSQEDTFQGR-------QKSKDK-------------MAT----- 410

  Fly   345 AGLTTSNVCNAHPVQTGTNQTVFA---TGNKVKQRVERDIAQPSPYCDFCLGDQRENKKTNMPEE 406
                        |.:.|:.::|.:   .|.|.|       ..|:..|..||..:..||| ...|.
  Rat   411 ------------PRKDGSKRSVLSKSVPGYKPK-------VIPNALCGICLKGKESNKK-GKAES 455

  Fly   407 LVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFCDDCDRGYHMYC 471
            |:.||.|..|||||||..|..::..:|.|.|||:|||.|.|||...::::::|||.||||||.:|
  Rat   456 LIHCSQCDNSGHPSCLDMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFCDVCDRGYHTFC 520

  Fly   472 LSPPLVTPPEGSWSCKLC 489
            :.  |...|.|.|.|..|
  Rat   521 VG--LGAIPSGRWICDCC 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
d4NP_610163.1 Requiem_N 30..98 CDD:290758 15/67 (22%)
PHD1_d4 387..442 CDD:277091 24/54 (44%)
PHD2_d4 444..489 CDD:277005 19/44 (43%)
Phf10XP_017444365.2 WH_NTD_PHF10 133..219 CDD:411035
PHD1_PHF10 438..491 CDD:277003 24/53 (45%)
PHD2_PHF10 493..536 CDD:277004 19/44 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312433at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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