DRSC/TRiP Functional Genomics Resources

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Protein Alignment d4 and dpf3

DIOPT Version :9

Sequence 1:NP_610163.1 Gene:d4 / 35485 FlyBaseID:FBgn0033015 Length:497 Species:Drosophila melanogaster
Sequence 2:XP_012823348.1 Gene:dpf3 / 100125167 XenbaseID:XB-GENE-6067294 Length:387 Species:Xenopus tropicalis


Alignment Length:487 Identity:165/487 - (33%)
Similarity:224/487 - (45%) Gaps:150/487 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQRMPGLRHGQIYTYPSSRWRK 95
            ||:.:|:..::|:|||.||.:|:||||.||||||.:|.::|:|:.|.||:..||:||||:..|||
 Frog    17 YKDAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGMAPGQLYTYPARCWRK 81

  Fly    96 PKRQYLLNPNQSFRA----------YQYREHNLQHSHHQTHQHHHHIPSSGVAVPQNPHLAESAA 150
            .:|   |:|.:..|.          :..|:.|:                          |||...
 Frog    82 KRR---LHPPEDPRLRLLEIKSDVDFPLRKDNV--------------------------LAEGTT 117

  Fly   151 IAATDGNSMGASGDNDSKDSHANVEKEWFHDE---MDTSHFHHGDEFEDDFDSDNDFDESYTSRG 212
            :.|.      ..|:        .:||:...||   .:.......||..||.:.::|.:|..    
 Frog   118 LEAL------LRGE--------GIEKKDVRDEESLQEIQRVLENDENADDANGEDDIEEEV---- 164

  Fly   213 KRKKCSRPRRTNANVEGTPKRGRKGGGNRRKNAVEGESDR--------KRRAGGNSANTSAAAAA 269
                   |:|.|.:      |||..||.||.:....|.|:        |::....:|:       
 Frog   165 -------PKRKNRS------RGRARGGRRRNDTSLDEHDKPYVCDNSYKQKHNSKTAD------- 209

  Fly   270 AAAAVAHAACTAAAVASTGL---YA-SHSNSASPIPINDDNSQSGLILPTNISSSYDKTSSDAGA 330
                   ..|........||   || :|..........|.:::|              .||.:..
 Frog   210 -------KVCGKRYKNRPGLSYHYAHTHLADEEGTDCRDQDTRS--------------PSSPSAI 253

  Fly   331 SNDSIPLATMVAINAGLTTSNVCNAHPVQTGTNQTVFATGNKVKQRVERDIAQPSPYCDFCLGDQ 395
            .|:                    |..| :.||:..:.:..                ||||||||.
 Frog   254 RNE--------------------NQKP-RKGTDGAILSNN----------------YCDFCLGDS 281

  Fly   396 RENKKTNMPEELVSCSDCGRSGHPSCLQFTANMIISVKRYRWQCIECKYCSICGTSDNDDQLLFC 460
            ..|||:..|||||||:||||||||:|||||.||..:||.|:|||||||.|.:||||:||:|||||
 Frog   282 SINKKSGQPEELVSCADCGRSGHPTCLQFTVNMTEAVKTYQWQCIECKSCIVCGTSENDEQLLFC 346

  Fly   461 DDCDRGYHMYCLSPPLVTPPEGSWSCKLCMEE 492
            ||||||||||||.||:..||||||||.||:.|
 Frog   347 DDCDRGYHMYCLIPPMAEPPEGSWSCHLCVHE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
d4NP_610163.1 Requiem_N 30..98 CDD:290758 35/66 (53%)
PHD1_d4 387..442 CDD:277091 40/54 (74%)
PHD2_d4 444..489 CDD:277005 34/44 (77%)
dpf3XP_012823348.1 Requiem_N 13..84 CDD:290758 35/66 (53%)
PHD1_DPF3 273..329 CDD:277162 41/55 (75%)
PHD2_d4 330..375 CDD:277005 34/44 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 131 1.000 Domainoid score I5095
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 305 1.000 Inparanoid score I2601
OMA 1 1.010 - - QHG49768
OrthoDB 1 1.010 - - D312433at33208
OrthoFinder 1 1.000 - - FOG0001297
OrthoInspector 1 1.000 - - otm47754
Panther 1 1.100 - - LDO PTHR10615
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X895
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.170

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