Sequence 1: | NP_001097192.2 | Gene: | Nipped-A / 35483 | FlyBaseID: | FBgn0053554 | Length: | 3790 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003750609.1 | Gene: | Atr / 685055 | RGDID: | 1305796 | Length: | 2636 | Species: | Rattus norvegicus |
Alignment Length: | 3710 | Identity: | 647/3710 - (17%) |
---|---|---|---|
Similarity: | 1181/3710 - (31%) | Gaps: | 1371/3710 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 361 LDSIRPLAYSTLAD-----LAHHVRQSLNIDVLIKAVNLFSKNVHDESLAVGIQTMSCKLLLNLV 420
Fly 421 DCLRHHSETEP--------------------QRSKALLSKLLKVFV--------KKF-ETIAKIQ 456
Fly 457 LPLIIQKCKGHAFSGALVNSSGNASLSHINAPDLKDDISNIQVSASGSQWIYSVNVAEFRSLVKT 521
Fly 522 LVGGVKTITWGFFN-SKFQLTDTKLANHEKIFGPEIVCSYIDLVYYAMEALDIYTINVNPNQQRT 585
Fly 586 SGLISRSKEEKEVLEHFSGIFLMMHSQNFQEIFSTTINFLVERIYKNQSLQVIANSFLANPTTSP 650
Fly 651 LFATVLVEYLLNKMEEMGSNLERSNLYLR-LFKLVFGSVSLFPVENE--QMLRP-HLHKIVNRSM 711
Fly 712 ELALISEEPYNYFLLLRALFRSIGGGSHDL-------LYQEFLPLLPNLLEGLNRLQSGFHKQ-H 768
Fly 769 MRDLFV-ELCLTVPVRLSSLLPYLPMLMDPLVSALNGSPTLISQGLRTLELCVDNLQPDFLYDHI 832
Fly 833 QPVRAALMQALWKTLRNQDNAALVAFRVLGKFGGGNRKMMVEPQALSYIINDKPTISIVTYFQEY 897
Fly 898 ETPIDFPVDEAIKSAFRALGSNSTDQFYRRQSWEVIRCFLAAFISLDDEKHMLLKLFTHVDFVEN 962
Fly 963 KIMNWSTFQHKAGNETVRETHQTALIGMLVASATKDLRDSVCPVMAAVVRHYTMVAIAQQAGPFP 1027
Fly 1028 QKGYQATHGIDPMILIDALAS--CM-----GHEEKELC------KPGIACMGIILDTATNIMGNK 1079
Fly 1080 DRACKLPI-------IQYLAEKMVSLCYDRPWYSKVGGC---QAIQFLCKHMSLRALFQ-NLFNF 1133
Fly 1134 LKAFMFV--LMDLEGDVSNGAIEITKSYMKSMLEICLTPINECYKNIDLK------DLQAKATYE 1190
Fly 1191 VIHELVRHITSPNTIVREESMVLLKHIGTIQSKTVSEVMDPHKDVLADIIPPKKHLLRHQPANAQ 1255
Fly 1256 IGLMDGNTFCT----------TLEPRLFTIDLTNTYHKLFFHELLTLSEAE------DATLAKLD 1304
Fly 1305 CY---KNVPNLIPLRTSALRALAACHYISDIGYKE------KIINIIFKVMESDKSELQTTAFHC 1360
Fly 1361 MKHFITGVTLEKEKVQSAMRPLLLKLGDHRNLSIPAIKRLSYFTQIFPQMFNEKLSEQILQHCSK 1425
Fly 1426 IMEIFVSEYKSTSPNVNFFASSKGGEYEQKIVILIEMFFYISASVK---YIEKLCQLVLKTEKNL 1487
Fly 1488 MIEASSPYREALIKFLQRFPTE---TVDLFLTESLMIDPQWNRLFIYLLKHETGV----SFRAVI 1545
Fly 1546 KSSRYNNLIHY----LNTHTE------FPEALKYEIQHQAVL--------------IIFTLMESD 1586
Fly 1587 DQWIPTRQDIVDALKNCWQNYLSTLSSEDVLCDLWHLIGKILLHYFSNNTNDIELLFQLLRALCF 1651
Fly 1652 RFIPDVYFLRDFLQHTVAQSFTVNWKRNAFFYFVENFNNSFLSEELKAKIITAVIIPCFAVSFDK 1716
Fly 1717 GEGNKLIGAPP--TPY-QEDEKNIVSVFINKVFDPDKQYDDAVRIALLQLACLLVERASQHIHDG 1778
Fly 1779 DA---NNKRQGNKLR----RLMTFAWPCLLSKSSVDPTARYHGHL--LLSHIIARL----AIHKK 1830
Fly 1831 IVLQVFHSLLKGHALEARSIVKQALDVLTPAMPLRMEDGNTMLTHWTKKIIVEEGHAMQQLFHIL 1895
Fly 1896 QLIIRHYKVYFPVRHQLVQHLINYMQRLGFPPTASIEHKKLAVDLAEVIIKWELHRIK----DDR 1956
Fly 1957 ETKTDGTEEELIQESSVKRSGIDLVETRKKSFDIIRETTVQGVGSHTKPDDILR-SIDKSYCDTV 2020
Fly 2021 LNFLIRL---ACQVNDPQAPILSPGESLSRRCVMLLKMAMRPEIWPQPFDIKLNWLDKVLATVET 2082
Fly 2083 PHHNLNNICTGIDFLTFLTTILSPDQLVSIIRPVQRGLSLCIIHQNTRIVRLMHMFLTRIMAIFP 2147
Fly 2148 PDTQHKHEDLDLLYTAVSKMIAENLTSYEKS-PQPNASSLFGTLMILKAC---TTNNASYIDRIL 2208
Fly 2209 VQFIRVLNHLTRDHINTIGGNTVISQSPDSNALPLELLVLSLELIKNRIFVMSVEIRKLFIGTIL 2273
Fly 2274 VSLIEKSTEVKIIKCIIKMLDEWIKTKEPNVMTQVPSIREKSALLVKLMQNVEKKFTDEIELNIQ 2338
Fly 2339 FLEIINFIYRDEILKQTELTNKLEGAFLNGLRFQNPNVRSKFFEILDSSMRRRLHDRLLYIICSQ 2403
Fly 2404 AWDTIGSHYWIKQCIELLILTANTMMQIQCSNEQFKIPSITSVIPVNSSETQENSFVSFLSSHSE 2468
Fly 2469 SFDIIQTVDDKDDVYDIDLNADRKEDCQQILPNRRVTLVELVYKQAEFLEANRNIRTDQMLVAT- 2532
Fly 2533 ---SQLCHIDTQLAQSVWLSMFPRI--WSIFTEDQRCNITKELIPFLSSGTNVNQKDCHPSTLNT 2592
Fly 2593 FVESLTKCAPPIYIPPNLLAYLGKSHNLWHRAILVLEDMAVNQSMQSKDIDGGENQFSDLDVQQS 2657
Fly 2658 NNI---FDSLSKMYSSMHEEDLWAGL-WLKFAHYPETNIAVSYEQMGFFEEAQGAYDLAMT---- 2714
Fly 2715 -------KFKQDLSNGVVNTYVNSELLLWEN--HWMRCAKELNQWDILLDYAQTNKDKNMFLILE 2770
Fly 2771 SSWRVPDWNLMKIALAKTEQCYLKHYGFKINLYKGYLSILHQEERQTGNIERYVEIASSLCIREW 2835
Fly 2836 RRLP-NIVSHIHLPYLQASQQIMELHEASQIHQGLAQSRNNSLHDMKAIVKTWRNRLP--IISDD 2897
Fly 2898 LSHWSDIFTWRQHHYQIITQHLEQQSDQGSTMLGVHASAQAIISFGKIARKHNLTGVCQETLSRI 2962
Fly 2963 YTIPSVPIVDCFQKIRQQVKCYLQMPSTSGKNEINEALEVIESTNLKYFTGEMNAEFYALKGLLL 3027
Fly 3028 AQIGRSEEAGKSFSVAAQLHDGLTKAWAMW--GDYMEQIFLKERKITLAVDALICYLQASRNQIE 3090
Fly 3091 SKTRKYIAKVLWFLSYDNNTKILISTLEKHVAGIPPSYWLPWIPQLLCCLEQFEGDVILNLLSQI 3155
Fly 3156 ---------GRLYPQAVYFPIRTLYLTLKIEQREKHKTAEQAVKSSCSNIDGTTLSFGRGASHGN 3211
Fly 3212 IPSINPIKATPPMWRCSKVMQLQREVHPTILSS-LEGIVDQMVWFRESWTEEVLRQLRQGLIKCY 3275
Fly 3276 AIAFEKRDTVQHSTITPHT-----LHFVKKLGSTFGIGIENVPGSVTSSISNSAASESLARRAQV 3335
Fly 3336 TFQDPVFQKMKEQFTNDFDFSKPGAMKLHNLISKLKTWIKVLETK--------VKKLPTSFL--- 3389
Fly 3390 --IEDKCRFLSNFS-----------------QKTAEVELPGELLIPLSS---------------H 3420
Fly 3421 -----YYVRIARFMPRVEI---VQKNNTAARRLYIRGTNGKIYPYLVVLDSGLGDARREERVLQL 3477
Fly 3478 KRMLNYYLEKQKETSRRFLNITVPRVVPISPQMRLAEDNPNSISLLKIFKKCCQSMQVDYDMPIV 3542
Fly 3543 KYYDRLSEVQARGTPTTHTLLR--EIFSEIQWTMVPK--TLLKHWALKTFLAATDFWHFRKMLTL 3603
Fly 3604 QLALAFLCEHALNLTRLNADMMYLHQDSGLMNISYFKFDVN----DDKCQLNQHRP------VPF 3658
Fly 3659 RLTPNVGEFITHFGITGPLSAAIVATARCFIQPNYKLSSILQTILRDEIIALQK--KGFRECKLI 3721
Fly 3722 EGSEDRYSDGNCMEHSVNIVNSAVDIIMTRFNKISYFD-SIENKKISVLVQSATNIDNLCRMDPA 3785
Fly 3786 WHPWL 3790 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nipped-A | NP_001097192.2 | FRB_dom | <2568..3790 | CDD:331513 | 251/1328 (19%) |
FAT | 2767..3102 | CDD:308074 | 54/339 (16%) | ||
PIKK_TRRAP | 3425..3712 | CDD:270707 | 71/303 (23%) | ||
Atr | XP_003750609.1 | UME | 1120..1226 | CDD:214825 | 25/113 (22%) |
FAT | 1766..2087 | CDD:280429 | 74/508 (15%) | ||
TEL1 | <2118..2636 | CDD:227365 | 130/577 (23%) | ||
PIKKc_ATR | 2285..2559 | CDD:270625 | 71/303 (23%) | ||
FATC | 2605..2636 | CDD:280430 | 12/31 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |