DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nipped-A and tefu

DIOPT Version :9

Sequence 1:NP_001097192.2 Gene:Nipped-A / 35483 FlyBaseID:FBgn0053554 Length:3790 Species:Drosophila melanogaster
Sequence 2:NP_001036712.1 Gene:tefu / 41839 FlyBaseID:FBgn0045035 Length:2767 Species:Drosophila melanogaster


Alignment Length:3504 Identity:638/3504 - (18%)
Similarity:1182/3504 - (33%) Gaps:1136/3504 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   642 FLANPTTSPLFATVLVEYLLNKMEEMGSNLERSNLYLRLFKLVFGSVSLFPVENEQMLRPHLHKI 706
            ||:.  ||.:..|.:.|.....:.:...|||..|  .::||.:.|...|:  :|.      |.||
  Fly    45 FLSK--TSDISWTTIFEASKEALFKQAGNLEDVN--EKVFKTLAGKNYLY--DNV------LEKI 97

  Fly   707 VNRSMELALISEEPYN-YFLLLRALFRSIGGG-SHDLLYQEFLPLLPNLLEGLNRLQSGFHK--Q 767
            ...::|..  |:...| :||...::|.:...| ...::.:.|...:.:|||      .|.:.  .
  Fly    98 TQFNLEAG--SQTSGNGHFLAKTSIFSAFEDGIKMRVVVKYFGDRILSLLE------KGIYSSVS 154

  Fly   768 HMRDLFVELCLTVPVRLSSLLPYLPML---MDPLVSALNGSPTLISQGLRTLELCVDNLQPDFLY 829
            ::|||.:.       ..|.:|.||..|   ||.::..     .::....||:.|..|.:|.    
  Fly   155 YVRDLKIN-------EYSRILSYLFELNVDMDEVLRT-----RILKCITRTVSLAKDRVQL---- 203

  Fly   830 DHIQPVRAALMQALWKTLRNQDNAALVAFRVLGKFGGGNRK--------MMVEPQALSYIINDKP 886
             |:.         |.:.|....:.||.||        |.||        :.....|::|  |.:.
  Fly   204 -HVD---------LVEYLPELSSFALSAF--------GARKTEIVRVYLIFASELAVNY--NHQL 248

  Fly   887 TI---SIVTYFQEYETPIDFPVDEAIKSAFRALGSNSTDQFYRRQSWEVIRCFLAAFISLDDEKH 948
            .:   .|:....||.....|..|  .::.|....|.|....|       ::..:..|.:|....|
  Fly   249 NVHMQEILPKLCEYHDEDAFRDD--TRNLFFQCVSKSLHSMY-------LKMDMCDFNTLGVPVH 304

  Fly   949 -----MLLKLFTHVDFVENKIMNWSTFQHKAGNETVRETHQTALIGMLVASATKDLRDSVCPVMA 1008
                 .||:|.|.|: ||.:..:|:..::             ||:.....|              
  Fly   305 EKWPQTLLRLKTIVN-VEIRKNSWARCKN-------------ALLSNNKFS-------------- 341

  Fly  1009 AVVRHYTMVAIAQQAGPFPQKGYQATHGIDPMILIDALASCM---------------GHEEKELC 1058
                                         ||.|.:.|||..:               |...|::.
  Fly   342 -----------------------------DPFIKMSALAMYIVLWHLETKKADENGEGDAPKKIP 377

  Fly  1059 KPGIACMGIILDTATNIMGNKDRACKLPIIQYLAEKMVSLCYDRPWYSKVGGCQAIQFLCKHMSL 1123
            ||                     |.|:..|..|.:|..: .::..|         :....:.:.|
  Fly   378 KP---------------------ADKMETIFSLIDKKEN-TFNDVW---------LAIFTEILQL 411

  Fly  1124 RALFQNLFNFLKAFMFV--LMDLEGDVSNGAIEITKSYMKSMLEIC----LTPINECYKNIDLK- 1181
            .::..|:.|:..|...|  :|.:.|:..|         ::: |.:|    ||...|...:..:: 
  Fly   412 SSVILNVANYQMALTTVAEIMQMYGNAKN---------LRN-LRLCLAHLLTKEQELLHSKSIRE 466

  Fly  1182 DLQAKATYEVIHELVRHITSPNTIVREESMV---LLKH-------IGTIQSKTVSEVMDPHKDVL 1236
            |...:...::.::|:...|:.:..::|:.:|   |::|       ..|:.:..:|..|....:.|
  Fly   467 DFLGELWSQMANQLISETTTNSEEIKEKQLVLQMLIRHNKLNQKLSSTLLNNIISNEMLKRNECL 531

  Fly  1237 ADIIPPKKHLLRH------QPANAQI--------GLMDG----------NTFCTTLEPRLFTIDL 1277
            |.|    :.:..|      ..|:|.:        |..|.          ::....|:...|.|.:
  Fly   532 ATI----REIFIHADKCGQDKASADLEPIIAWAYGSADRFIAAQMIHNIDSIDAQLQADTFAISI 592

  Fly  1278 TNTYHKLFFHELLTLSEAEDATLAKLDCYKNVPNLIPLRTSALRALAACHYISDIGYKEKII--- 1339
            .|.   |...:|..:|::|              :::|   |..|.|.|      ..|.|::|   
  Fly   593 INF---LDVQQLRQISQSE--------------HIVP---STERNLLA------YKYNEQLICFD 631

  Fly  1340 -------NIIFKVMESDKSELQTTAFHCMKHFITGVTLEKEKVQSAMRPL--LLKLGDHRNLSIP 1395
                   ..|..:....|:.|..:.:.|:...:.....::.|..:.::.|  ||||       |.
  Fly   632 KDYATPFESITHIQSETKNCLIQSNYDCLMRGLNFEIAKENKPAAIIKNLNSLLKL-------IC 689

  Fly  1396 AIKRLSYFTQIFPQMFNEKLSEQILQHCSKIMEIFVSEYKSTSPNVNFFASSKGGEYEQK--IVI 1458
            .::||.:: ::|        .......|..|..|.:  |.|   ::.|...:.|.|...|  :..
  Fly   690 TMERLLHY-KVF--------DADTYTGCPLIKRIGL--YLS---HIEFQLKANGAEILDKSDLPE 740

  Fly  1459 LIEMFFYISASVKYIEKLCQLVLKTEKNLMIEASSPYREALIKFLQRFPTETVDLFLTESLMIDP 1523
            ::.:..|:..           |.:|  ||:          |:.:|:|.|.|.:..|:..:|.   
  Fly   741 ILRLEIYVLD-----------VFRT--NLV----------LLDYLERQPIEMLVEFVGAALK--- 779

  Fly  1524 QWNRLFIYLLKHETGVSFRAVIKSSRYNNLIHYL---NTHTEFPEALKYEIQ-----H-QAVLII 1579
                  ::.::.|..|.......:....|::..|   |:|.:  ||.::.::     | |.|||:
  Fly   780 ------LHSMQRERSVDADHGTITRLCLNILAGLCAYNSHRD--EAFEHIVKVTMRWHPQDVLIV 836

  Fly  1580 F-------TLMESDDQWIPTRQDIVDALKNCWQ-------------NYLSTL-----SSEDVLCD 1619
            .       |:.|:...|      :|..||..:|             .::.|:     ..|:.|.|
  Fly   837 TKMLCSCQTISEASSSW------LVSKLKTLFQQHHQDAELMDKVVQHMPTIFYFVRHKENHLDD 895

  Fly  1620 LWHLIGKIL-----LHYFSNNTNDIELLFQLLRALCFRFIPDVYFLRDFLQHTVAQSFTVNWKRN 1679
            :...:..:|     ..|.||.|..|.....|:...|    ||:|.|         ::|.|..|..
  Fly   896 MLMALNSLLRIAIKKSYTSNLTAKIVRCVGLIAQRC----PDIYLL---------ENFAVICKST 947

  Fly  1680 AFFYFVENFNNSFLSEELKAKIIT-AVIIPCFAVSFDKGEGNKLIGAPPTPYQEDEKNIVSVFIN 1743
            |.|..:......|      |.:.| .:::....|:.|      .||...|.:...::...|:...
  Fly   948 AKFITMPTLEVRF------ATLFTFTILLESNCVTSD------AIGHSRTHWDFCQELYESIEFK 1000

  Fly  1744 KVFDPDKQYDDAVR---IALLQLACLLVERASQHIHDGDANNKRQGNKLRRLMTFAWPCLLSKSS 1805
            |:   ....:||::   ..::|:...:..|:|.|          |...|:.              
  Fly  1001 KL---TYNNEDAIQNSNALIVQMLIAIFLRSSFH----------QEIALKE-------------- 1038

  Fly  1806 VDPTARYHGHLLLSH-IIARLAIHKKIVLQVFHSLLKGHALEARSIVKQALDVLTPAMPLRMEDG 1869
                       ||.| .:.||...:.|.||   |:...|....|.:::....:|           
  Fly  1039 -----------LLHHCALRRLTEREFISLQ---SMSSCHRQTVRDLIRPFAAIL----------- 1078

  Fly  1870 NTMLTHWTKKIIVEEGHAMQQLFHILQLIIRHYKVYFPVRHQLVQHLINYMQRLGFPPTASIEHK 1934
               |.||:.|                    |.....||       :.:.|..:..|..|.:    
  Fly  1079 ---LHHWSSK--------------------RWPISKFP-------YFLCYSTKSEFRKTHA---- 1109

  Fly  1935 KLAVDLAEVIIKWELHRIKDDRETKTDGTEEELIQESSVKRSGIDLVETRKKSFDIIRETTV-QG 1998
                  :|::....|:...:|.|..:....|||         .:.::    .||.:|:.::. :.
  Fly  1110 ------SEIMAYTFLYGKTEDIERCSKSISEEL---------ALPIL----ASFLLIKNSSCSES 1155

  Fly  1999 VGSHTKPDDILRSIDKSY-------CDTVLNFLIRLACQVNDPQAPI-----------------L 2039
            .|.:.|....|.|.:.||       .|..|:.|..:...::|||..:                 |
  Fly  1156 EGQNFKEHLQLLSENLSYSQLNATDVDLDLDILCYVISMLHDPQEMMRLFGSLAICNRTASWYSL 1220

  Fly  2040 SPGESLSRRCVMLLKMAMRPEIWPQPFDIKLNWLDKVLATVETPHH--------NLNNICTGIDF 2096
            | ||||. :|   |...:.||:.|. .|.::    :.:.|::|.|.        .|...|....|
  Fly  1221 S-GESLF-KC---LNFHIDPEMRPS-MDSRI----QSMTTLQTKHSRVLVDIFGRLKTNCYSASF 1275

  Fly  2097 LT------FL---------------TTILSPDQLVSIIRPVQRGLSLCIIHQNTRIVRLMHMFLT 2140
            .:      ||               .||::  |....:|.:...:...:||  |:.:|:....||
  Fly  1276 SSQALHDFFLYCEVADAVYDAARKNETIVT--QCSFFVRDIWFFVVRLLIH--TKFIRVQMAALT 1336

  Fly  2141 RIMAIFPPDTQHKH----EDLDLLYTAVSKMIAE-NLTSYEKSPQPNASSLFGTLMILKACTTNN 2200
            .:..:.     :||    :|....:..::|:::. .|....|..:....|:...::..|....|.
  Fly  1337 FLELLL-----NKHNFRLDDYQNHFGDIAKLLSNFQLCCEAKEVREKTMSIVMYILESKKGHINL 1396

  Fly  2201 ASYIDRIL-VQFIRVLNHLTRDHINTIGGNTVISQSPDSNALPLELLVLSLELIKN-RIFVMS-- 2261
            .|:::... .:|::.|    |:...:...|  |.::..:|.|...||..:.|.::: |.::..  
  Fly  1397 NSFLEETTDCEFLKPL----REDCKSSQPN--IDRADVANYLRSFLLSPTPERLRDLRTYIAEHK 1455

  Fly  2262 ---VEIRKLFIGTI--LVSLI----EKSTEVKIIKCIIKMLDEWIKTKEPNVMTQVPSIREKS-- 2315
               .|..||..|.|  |:.:.    .|:|.:..:||:.::....|.|......|...:. |||  
  Fly  1456 DKVQEHEKLLFGVINKLIQMTRDAHNKTTSIDSLKCLAQIGPLKISTVSYYFQTDFEAF-EKSNG 1519

  Fly  2316 ------------ALLVKLMQNVEKKFTDEIELNIQFLEIINFIYRDEILKQTELTNKLEGAFLNG 2368
                        :|...|.|...|.....:.:.||   ::|......|:::          :.|.
  Fly  1520 EPMEAFLGVVCHSLDTSLFQFDPKTHEGLVSVAIQ---VVNSKPGSNIMER----------YKNL 1571

  Fly  2369 LRFQNPNVRSKFFEILDSSMRRRLHDRLLYIICSQAWDTIGSHYWIKQCIELLILTANTMMQIQC 2433
            ..|.:.:..|.|   |.|:.:.|   |:.::...:|..::....|:...:..:......:...:.
  Fly  1572 RIFADKSTASTF---LHSNKQIR---RIDWLSILKATKSLSYEPWMCAFVSKVFQMCGWLGFDKL 1630

  Fly  2434 SNEQFKIPSITSVIPVNSSETQENSFVSFLSSHSESFDIIQTVDDKDDVYDIDLNADRKEDCQQI 2498
            :...|.... |.::|          |:..|..:  |.:.::::....|.:.....:....:.|:|
  Fly  1631 AATSFAFAK-TCLLP----------FIKLLLEN--SLEHVESLSQMLDYFFEGFTSSTAPNSQEI 1682

  Fly  2499 LPNRRVTLVELVYKQAEFLEANRN----IRTDQMLVATSQLCHIDTQLAQSVWLS-MFPRIWSIF 2558
            ..|:|.  ::......|::....|    |....:::|::.        .|:.:|| |:..:|:  
  Fly  1683 FRNKRA--IKKFLHICEYIRIFNNWTIPINLSNVVMASNH--------CQAYFLSIMYLELWA-- 1735

  Fly  2559 TEDQRCNIT-KELIPFLSSGTNVNQKDCHPSTLNTFVESLTKC--APPIYIPP--NLLAYLGKSH 2618
                 |:.: |....||.:       :|.........||: .|  |.|.::.|  :.|.:||...
  Fly  1736 -----CSESPKSKADFLDN-------ECFQDGAKKAYESI-GCLDAIPGFVNPMRSRLDFLGHGS 1787

  Fly  2619 NLWHRAILVLEDMAVNQSMQSKDIDGGENQFSDLDVQQSNNIFDSLSKMYSSMHEEDLWAGLWLK 2683
            ||   :.::||         |..:|....|.. :|:.:.|                    ||| .
  Fly  1788 NL---STILLE---------SDHLDRASGQLC-IDIMKGN--------------------GLW-S 1818

  Fly  2684 FAHYPE-TNIAVSYE---QMGFFEEAQGAYDLAMTKFKQDLSNGVVNTYVNSELLLWENHWMRCA 2744
            ||...: .||...||   ::|.::        ::|..|...:..||.|.::.|.....:|:: ..
  Fly  1819 FAKLQQHQNIEPDYEIFWRLGQWD--------SLTDPKHQQNQTVVRTSLDLEQEFKRHHFV-AL 1874

  Fly  2745 KELNQWDILLDYAQTNKDKNMFLILESSWRVPDWNLMKIALAKTEQCYLKHYGFKINLYKGYLSI 2809
            :.:.|          .:::|....:|.::......||:|::...:..|         .|..:|..
  Fly  1875 RSIGQ----------REEENSLSAIEQAYSCVRDILMEISVECLQSVY---------KYLTWLCS 1920

  Fly  2810 LHQEER----QTGNIERYVEIASSLCI-REWR-----RLPN------IVSH----IHLPYLQASQ 2854
            |.|.|.    |.|.   .::.||:..| |:|:     :..|      :::|    :.|...:||:
  Fly  1921 LQQAEDFCQIQFGT---QLDPASTTKIFRKWQTELELKYGNFSCKEYVIAHQIALLKLAGTRASR 1982

  Fly  2855 QIMELHE----ASQIHQGLAQSRNNSLHDMKAIVKTWRNRLPIISDDLSHWSDIFTWRQHHYQII 2915
            ::.|.::    ::.:.:|:.:.::....::.|........||.|.:.:.            ..::
  Fly  1983 RMSEFYQKDPISTYLMKGIEECKSAGKLNLAAKYTATLRELPNIRESIK------------ISVL 2035

  Fly  2916 TQHLEQQSDQGSTMLGVHASAQAIISFGKIARKHNLTGVCQETLSRIYTIPSVPIVDCFQKIRQQ 2980
            .:..|.....|:..:     |:||:.:  :...:..          :|.:..||      .:|.|
  Fly  2036 LEDAEINLKMGNQQI-----AKAILDY--VTNNNEF----------VYCVQRVP------ALRMQ 2077

  Fly  2981 ----VKCYLQMPSTSGKNEINEALEVIE---------STNLKYFTGEMNAEFYALKGLLLAQIGR 3032
                :.|..:..|....::.|.:|::|:         |...:........:.||.|....|....
  Fly  2078 GEFLLDCNAETLSWVQSHKFNNSLKLIDDFVQHRQTLSEKYRDIFDWHQLDAYASKQRTAAYATI 2142

  Fly  3033 SEEAGKSFSVAAQLHD-GLTKAWAMWGDYMEQIFLKERKITLA--VDALICYLQASR-------- 3086
            ::.|.:.:.   |||| ..::.:....|.:||......|:|..  .|..:..:|..|        
  Fly  2143 AKYADREYQ---QLHDYRHSQEYQTLKDIIEQNRQTAEKVTQRENQDRRVISVQMKRYASLDEQQ 2204

  Fly  3087 -NQIESKTRKYIAKVLW-FLSYDNNTKILISTLEKHVAGIPPSYWLPWIPQLLCCLEQFEGDVIL 3149
             ||||.|..:|:...|. :::|                               |.|:..      
  Fly  2205 LNQIEEKLTEYLRLALTNYMAY-------------------------------CRLDSG------ 2232

  Fly  3150 NLLSQIGRLYPQAVYFPIRTLYLTLKIEQREKHKTAEQAVKSSCSNIDGTTLSFGRGASHGNIPS 3214
                     :..|..:.|.:|:.|     ....|..::.:|....                .:||
  Fly  2233 ---------FSSAAIYRIISLWFT-----NATSKQCQECIKDEIL----------------TVPS 2267

  Fly  3215 INPIKATPPMWRCSKVMQLQREVHPTILSSLEGIVDQMVWFRESWTEEVLRQLRQGLIKCYAIAF 3279
            ...|.|         ..||...::....|.|:|:.|.:|...:........||       |.:.|
  Fly  2268 YKFICA---------ANQLTARLNSKNTSLLKGLTDLLVQCGKDHPYHTFYQL-------YPLVF 2316

  Fly  3280 EKRD----TVQHSTITPHTLHFVKKLGSTFGIGIENVPGSVTSSISNSAASESLARRAQVTFQDP 3340
            ...|    ..:.|.|....:..:.:...|.|              ..|...|||. .|.:||.: 
  Fly  2317 AHLDGENSNTERSGIARKIIAMICEKNGTAG--------------ECSKQLESLL-PALITFAN- 2365

  Fly  3341 VFQKMKEQFTNDFDFSKPGAMKLHN-LISKLKTWIKVLETKVKKLPTSFLIEDKCRFLSNFSQKT 3404
                  |..|||   ::|.:..:.| ...|::.|..:   .....||                  
  Fly  2366 ------EGKTND---NRPVSDSVRNKQFDKVRRWRNL---NAVHCPT------------------ 2400

  Fly  3405 AEVELPGELLIPLSSHYYVRIARFMPRVEIVQKNN--------TAARRLYIRGTNGKIYPYLVVL 3461
              :|||   ::| |..|.:        :.:|:..|        .|..::....::|||...||  
  Fly  2401 --LELP---VMP-SKEYSI--------ISVVKWTNETTQCGGLNAPVKIMCVCSDGKIRAQLV-- 2449

  Fly  3462 DSGLGDARREERVLQLKRMLNYYLEKQKETSRRFLNITVPRVVPISPQMRLAEDNPNSISL---- 3522
             .|..|.|::..:.|:..::|..|.:..|...|.|.:...:|.|:|.:..:.|...||:.:    
  Fly  2450 -KGKDDLRQDAVMQQVFGIVNELLNQDSEFIERKLKLRTYKVTPLSMRSGILEWCTNSVPVGHYL 2513

  Fly  3523 -----------------------------LK--------IFKKCCQSMQVDYDMPIVKYYDRLSE 3550
                                         ||        |:||.|::::                
  Fly  2514 VVEGKGGAHARYRPNDWNNNKCRKLSSDHLKSPKETRYAIYKKICENIK---------------- 2562

  Fly  3551 VQARGTPTTHTLLREIFSEIQWTMVPKTLLKHWALKTFLAATDFWHFRKM-LTLQLALAFLCEHA 3614
                  |..|..|.|.|.      :|                ..|..|:: .|..:|...:..:.
  Fly  2563 ------PVFHYFLLEKFP------IP----------------GVWFERRLAYTNSVATTSMVGYV 2599

  Fly  3615 LNL-TRLNADMMYLHQDSGLMNISYFKFDVNDDKCQLNQHRPVPFRLTPNVGEFITHFGITGPLS 3678
            |.| .|...:::...|.:.:::|. |.......|.|... ..||||||   .:|:...||.|...
  Fly  2600 LGLGDRHTQNILVDQQTAEVIHID-FGIAFEQGKIQTTP-ETVPFRLT---RDFVAPMGICGTKG 2659

  Fly  3679 A-AIVATARCFIQPNYK--LSSILQTILRDEII---ALQKKGFRECKLIEGSEDRYSDGNCMEHS 3737
            . |....|...|...||  .::||:.:|.|.:.   .|:||              .|.....|.|
  Fly  2660 VFAKSCEATMHILRRYKSVFTTILEVLLYDPLFIWGVLKKK--------------QSPQQSGEES 2710

  Fly  3738 VNIVNSAVDIIMTRFNKI------SYFDSIENKKISVLVQSATNIDNLCRMDPAWHPWL 3790
            ||:|.....:::.  ||:      :..||....::..|:..||...|||.:.|.|.|.|
  Fly  2711 VNLVAQRALLLVQ--NKLDGREAGTMGDSNVEAQVERLINEATLPSNLCMLFPGWDPHL 2767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nipped-ANP_001097192.2 FRB_dom <2568..3790 CDD:331513 249/1347 (18%)
FAT 2767..3102 CDD:308074 67/383 (17%)
PIKK_TRRAP 3425..3712 CDD:270707 67/343 (20%)
tefuNP_001036712.1 FAT 1829..2170 CDD:280429 66/409 (16%)
PIKKc_ATM 2416..2696 CDD:270715 66/331 (20%)
FATC 2739..2767 CDD:280430 9/27 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464450
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11139
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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