Sequence 1: | NP_001097192.2 | Gene: | Nipped-A / 35483 | FlyBaseID: | FBgn0053554 | Length: | 3790 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101797.2 | Gene: | Prkdc / 360748 | RGDID: | 1308982 | Length: | 4126 | Species: | Rattus norvegicus |
Alignment Length: | 4548 | Identity: | 807/4548 - (17%) |
---|---|---|---|
Similarity: | 1464/4548 - (32%) | Gaps: | 1528/4548 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 273 EFMGAQIKTLSFLAYIVRIFQEVVIASSLSVTSGMLNL-----MKNCPKEAAHLRKELLIAARHI 332
Fly 333 FATDLRQKFIPSIEQLFDE--DLLIGKGVTLDSIRPLAYSTLADLAH-HVRQSLNIDVLIKAVNL 394
Fly 395 F-----------SKNVHDESLAV------GIQTMSCKLLLNLVDCLRHHSETEPQRSKALLSKLL 442
Fly 443 KVFVKKFETIAKIQLPLI-IQKCKGHA--FSGALVNSSGNASLSHINAPDLKDDISNIQVSASGS 504
Fly 505 QWIYSVNVAEFRSLVKTLVGGVKTITWGFFNSKFQLTDTKLANHEKIFGPEIVCSYIDLVYYAME 569
Fly 570 ALDIYTI--NVNPNQQ------RTSGLIS---RSKEEKEVLEHFSGIFLMMHSQNFQEIFSTTIN 623
Fly 624 FLVERIYKNQS-LQVIANSFLANPTTSPLFATVLVEYLLNKMEEMGSNLERSNLYL--RLFKLVF 685
Fly 686 GSVSLFPVE--------NEQMLR-----PHLHKIVNRSMELALISEE---------PY-NY---- 723
Fly 724 ------------------FLLLRALFRSIGGGSHDLLYQEFLPLLPNLLEGLN----RLQSGFHK 766
Fly 767 -QHMRDLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNGSPTLISQGLRTLELC--------VDN 822
Fly 823 LQP---DFLYDHI-QPVRAALMQALWKTLRNQDNAALVAFRVLGKFGGGNRKMMVEPQALSYIIN 883
Fly 884 DKPTISIVTYFQEYETPIDFPV----DEAIKSAFRALGSNSTDQFYRRQSWEVIRCFLAAFISLD 944
Fly 945 DEKHMLLKL-FTHVDFVE---NKIMNWSTFQHKAGNETVRETHQTALIGMLVASATKDLRDSVCP 1005
Fly 1006 VMAAVVRHYTMVAIAQQAGPFPQKGYQATHGIDPMILIDALASCMGHEEKELCKPGIACMGII-- 1068
Fly 1069 --------LDTATNIMGNK-------DRACKL----------PIIQYL------AEKMVSLCYDR 1102
Fly 1103 PWYSKVGGCQAIQFLCKHMSLRAL-------FQNLFNFLKAFMFVLMDLEGDVSNGAIEI----- 1155
Fly 1156 -----------------TKSYMKSMLEICLTPIN--------ECYKNI-------------DLKD 1182
Fly 1183 LQAKATYEVIHELVRHITSPNTIVREESMVLLKHI-------GTIQSKTVSEVMDPHKDVLA--- 1237
Fly 1238 -------------DII----------------PPKKHLLRHQPANAQIGLMD-----------GN 1262
Fly 1263 TFC--TTLE--------------PRLFTID---------LTNTY---------------HKLFFH 1287
Fly 1288 -----ELLTLSEAEDATLAKLDCYKNVPNLIPLRTSALRALAACHYISDIGYKEKIINIIFKVME 1347
Fly 1348 SDKSELQTTAFHCMKHFITGV------TLEKEKVQSAMRPLLLKLGDHRNLS-IPAIKRLSYFTQ 1405
Fly 1406 IFPQMFNE--KLSEQILQHC-SKIMEIFVS---------------EYKSTSPN--VNFFASSKGG 1450
Fly 1451 EYEQKIVILIEMFFYISASVKYIEKLCQLVLKTEKNLMIEASSPYREALIKFL-----------Q 1504
Fly 1505 RFPTETVDLFLTESL----------------------MIDPQWNRL-----------------FI 1530
Fly 1531 YLLKHETGVSFRAVIKSSRYNNLIHYLNTHTEFPEALKYEIQHQAVLIIFTLMESD--------- 1586
Fly 1587 -----------DQWIPTRQ--DIVDALKNCWQNYLSTLSSEDVLCDLWHLIGKILLHYFSNNTND 1638
Fly 1639 IELLFQLLRALCFRFIPD---------VYFLRDFLQHTVAQSFTVNWKRNAFFYFVENFNN---- 1690
Fly 1691 SFLSEELKAKIITAVIIPCFA-VSFDKGEGNKLIGAPPTPYQEDEKNIVSVFI-------NKVFD 1747
Fly 1748 PD-----------KQYDDAVRIA----LLQLACLLVERASQHIHD-------------------- 1777
Fly 1778 -------------GDANNKRQGNKLRRLMTFAWPCLLSKSSVDPTARYHGHLLLSHI-------- 1821
Fly 1822 ---------IARLAIHKKIVLQVFHSLLKGHALEARSIVKQALDVLTPAMPLRMEDGNTM----- 1872
Fly 1873 -LTH--WTKKI-----IVEEGHAMQQLFH---------ILQLIIRHYKVY----FPVRHQ----L 1912
Fly 1913 VQHLINYMQRLGFPPTASI--EHKKLAVDLAEVIIKWELHRIKDDRETKTDG-----------TE 1964
Fly 1965 EELIQESSVKRSGIDLVETRKKSFDIIRETTVQGV---GSHTKP----------------DDILR 2010
Fly 2011 SIDKSYCDTVLNFLIRLACQVNDPQAPILSPGESLSRRCVMLLKMAMRPEIWPQPFDIKLN---- 2071
Fly 2072 -WLDKVLATVETPHHNLNNICTGIDFLTFLTTILSPDQLVSIIRPVQR-------GLSLCIIHQN 2128
Fly 2129 TRIVRLMHMFLTRIMA-------IFPPDTQHKHEDL--DLLYTAVSKMIAENLTSYEKSPQPNAS 2184
Fly 2185 SLFGTLMILKA---CTTNNASYIDRILVQFIRVLNHLTRDHINTIG----GNTVISQSPD----- 2237
Fly 2238 --SNALPLELLVLSLELIK-NRIFVMSVEIRKLFIGTILVSLIEKSTEV--KIIKCIIKMLDEWI 2297
Fly 2298 KTKEP-------NVMTQVPSIREK--SAL--LVKLMQNVEKKFTDEIEL--------------NI 2337
Fly 2338 QFLEIINFIYRDE---------------ILKQTELTNKLEGAFLNGLRFQNPNVRSKFFEIL--- 2384
Fly 2385 -----------------------DSSMRRRLHDRL-LYIICSQAWD--------------TIGSH 2411
Fly 2412 YWIKQCIELLILTANTMMQI-----------------QCSNEQFKIPS----ITSVIPVNSSETQ 2455
Fly 2456 ENSFVSFLSSHSE---------------------SFDIIQTVDDKDDVYD------IDLNAD--- 2490
Fly 2491 ---------------RKEDCQQI---------------LPNRRV--TLVELVYKQAEFLEANRNI 2523
Fly 2524 RTDQ----MLVATSQLC---------------------------HIDTQLAQSVWLSMFPRIWSI 2557
Fly 2558 FTEDQRCNITKELIPFLSSGTNVNQKDCH----PSTLNTFVESLTK------CAPPIYIPPNLLA 2612
Fly 2613 YLGKSHNLWHRAILVLEDMAVNQS-MQSKDIDGGENQFSDL----------------------DV 2654
Fly 2655 QQSNNIFDSLSKMYSSMHEEDLWAGLWLKFAHYPETNIAVSYE-QMGFFEEAQGAYDLAMTKFKQ 2718
Fly 2719 DLS--NGVVNTYVNSELLLWENHWMRCAKELNQWDILLDYAQT-NKDKNMFLILESSWRVPDWNL 2780
Fly 2781 MKIALAKTEQCYLKH-YGFKINL------------------------------YKGYLSILHQEE 2814
Fly 2815 RQTGNIERYVEIASSLCIREWRRLPNIVSHIHLPYLQASQQIMELHEASQI---HQGLAQSRNNS 2876
Fly 2877 LHDMKAIVKTWRNRLP-IISDDLSHWSDIFT---------------------------------- 2906
Fly 2907 ---------------------------WRQHHYQIITQ-----HLEQQSDQGSTMLGVHASAQAI 2939
Fly 2940 ISFGKIARKHNLTGVCQETLSRIYTIPSVPIVD------------CFQKIRQQVKCYLQMPSTSG 2992
Fly 2993 KNEINEALEVIESTNLKYFTGE--MNAEFYALKGLLLAQIGRSEEAGKSFSVAAQLHDGLTKAWA 3055
Fly 3056 MWGD---------YMEQIFLKERKITLAVDALICYLQASRNQIESKTRKYIAKVLWFLSYDNNTK 3111
Fly 3112 IL----------------ISTLEKHVAGIPPSYWLPWIPQLLCCLEQFEGDVILNLLSQIGRLYP 3160
Fly 3161 QAVYFPIRTLYLTLKIEQREKHKTAEQAVKSSCSNIDGTTLSFGRGASHGNIPSINPIKATPPMW 3225
Fly 3226 RCSKVMQLQREVHPTILSSLEGIVDQMVWFRESWTEEVLRQL------RQGLIKCYAIAFEKRDT 3284
Fly 3285 VQHSTITPHTLHFVKKLGSTFGIGIENVPGSVTSSISNSAA---SESLARRAQVTFQDPVFQKMK 3346
Fly 3347 EQFTNDFDFSKPGAMKLHNLISKLKTWIKVLETKVKKLPTSFLIEDKCRFLSNFSQKTAEVELPG 3411
Fly 3412 EL---LIPLSSHYYVRIARFMPRVEIVQKNNTAARRLYIRGTNGKIYPYLVVLDSGLGDARREER 3473
Fly 3474 VLQLKRMLNYYLEKQKETSRRFLNITVPRVVPISPQMRLAEDNPNSISLLK-IFKKCCQSMQVDY 3537
Fly 3538 D----MPIVKYYDRLSEVQARGTPTTHTLLREIFSEIQWT-----------MVPKTLLKHWALKT 3587
Fly 3588 FLAATDFWHFRKMLTLQLALAFLCEHALNLTRLNADMMYLHQDSGLMNISYFKFDVNDDKCQLNQ 3652
Fly 3653 HRPV----PFRLTPNVGEFITHFGITGPLSAAIVATARCF---------------IQPNYKLSSI 3698
Fly 3699 LQTILR------DEIIALQKKGFRECKLIEGSEDRYSDGNCMEHSVNIVNSAV------------ 3745
Fly 3746 ------DIIMTRFNK------------ISYFDSIENKKISVLVQSATNIDNLCRMDPAWHPWL 3790 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nipped-A | NP_001097192.2 | FRB_dom | <2568..3790 | CDD:331513 | 278/1481 (19%) |
FAT | 2767..3102 | CDD:308074 | 71/458 (16%) | ||
PIKK_TRRAP | 3425..3712 | CDD:270707 | 80/327 (24%) | ||
Prkdc | NP_001101797.2 | NUC194 | 1813..2196 | CDD:369725 | 80/460 (17%) |
FAT | 3087..3471 | CDD:367004 | 63/403 (16%) | ||
TEL1 | <3457..4013 | CDD:227365 | 132/653 (20%) | ||
PIKKc_DNA-PK | 3717..4012 | CDD:270716 | 74/305 (24%) | ||
FATC | 4096..4126 | CDD:367005 | 10/34 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |