DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nipped-A and Prkdc

DIOPT Version :9

Sequence 1:NP_001097192.2 Gene:Nipped-A / 35483 FlyBaseID:FBgn0053554 Length:3790 Species:Drosophila melanogaster
Sequence 2:NP_001101797.2 Gene:Prkdc / 360748 RGDID:1308982 Length:4126 Species:Rattus norvegicus


Alignment Length:4548 Identity:807/4548 - (17%)
Similarity:1464/4548 - (32%) Gaps:1528/4548 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 EFMGAQIKTLSFLAYIVRIFQEVVIASSLSVTSGMLNL-----MKNCPKEAAHLRKELLIAARHI 332
            ||...:.:.|.||...:....:.|:..|..:.:..:::     ...|...|..|..:||...|  
  Rat    77 EFRDCREEALKFLCVFLEKIDQKVLHYSFDIKNTCISVYTKDRTAKCKIPALDLLIKLLKILR-- 139

  Fly   333 FATDLRQKFIPSIEQLFDE--DLLIGKGVTLDSIRPLAYSTLADLAH-HVRQSLNIDVLIKAVNL 394
             ::.:..:|  .|.:||::  ..|:.|....|::....|..|..|.. |..:.:|     .:.||
  Rat   140 -SSRVMDEF--KIGELFNKFYGELVSKSKLPDTVLEKVYELLGVLGEVHPSEMVN-----HSENL 196

  Fly   395 F-----------SKNVHDESLAV------GIQTMSCKLLLNLVDCLRHHSETEPQRSKALLSKLL 442
            |           :..|.:....|      |:.::.|....::        |.:||.||.:....|
  Rat   197 FRAFLGELKTQMTSTVREPKFPVLAGCLKGLSSLLCNFTKSM--------EEDPQTSKEIFGFTL 253

  Fly   443 KVFVKKFETIAKIQLPLI-IQKCKGHA--FSGALVNSSGNASLSHINAPDLKDDISNIQVSASGS 504
            |....:.| :.:..:||. ::....||  |:..|                |.:.|:..:|.   |
  Rat   254 KAIRPQIE-MKRYAVPLAGLRLLTLHASQFTTCL----------------LDNYITLFEVL---S 298

  Fly   505 QWIYSVNVAEFRSLVKTLVGGVKTITWGFFNSKFQLTDTKLANHEKIFGPEIVCSYIDLVYYAME 569
            :|....||...::....|...:|.|:       |.:.:....:..|:             .|.||
  Rat   299 KWCNHTNVELKKAAHSALESFLKQIS-------FTVAEDAELHKSKL-------------KYFME 343

  Fly   570 ALDIYTI--NVNPNQQ------RTSGLIS---RSKEEKEVLEHFSGIFLMMHSQNFQEIFSTTIN 623
              ..|.|  |.:.|.:      |..||.:   :....|:|  .|..:.|:   |..:::|.|..:
  Rat   344 --QFYGIIRNADSNNKDLAIAIRGYGLFAGPCKVINAKDV--DFMYVELI---QRCKQMFLTQTD 401

  Fly   624 FLVERIYKNQS-LQVIANSFLANPTTSPLFATVLVEYLLNKMEEMGSNLERSNLYL--RLFKLVF 685
            ...:.:|:..| ||.||:..|...|...::..||...::.:::.......:..|..  .|.|:..
  Rat   402 ATEDHVYQMPSFLQSIASVLLYLDTVPEVYTPVLEHLMVVQIDSFPQYSPKMQLVCCKALVKVFL 466

  Fly   686 GSVSLFPVE--------NEQMLR-----PHLHKIVNRSMELALISEE---------PY-NY---- 723
            ......||.        ::.::|     ..|.|.|....|....|||         .| :|    
  Rat   467 SLTEKGPVHWNCISAVVHQGLIRICSKPVVLQKDVESRSENRWASEEVRMGRWKVPTYKDYVDLF 531

  Fly   724 ------------------FLLLRALFRSIGGGSHDLLYQEFLPLLPNLLEGLN----RLQSGFHK 766
                              ||.:.:..:|:    :.|||.||:..:..::|.|:    :..:|..:
  Rat   532 QNLLGCDQMADFILGDETFLFVNSSLKSL----NHLLYDEFIRSVLKIVEKLDLTLEKQTTGEQE 592

  Fly   767 -QHMRDLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNGSPTLISQGLRTLELC--------VDN 822
             :...|::|     :|.            .||..:.....|...|..:..:|.|        |..
  Rat   593 DERTADVWV-----IPT------------SDPAANLHPIKPNDFSAFINLVEFCREILPKKQVSF 640

  Fly   823 LQP---DFLYDHI-QPVRAALMQALWKTLRNQDNAALVAFRVLGKFGGGNRKMMVEPQALSYIIN 883
            .:|   .|.|:.| |..|..|:...:|.|    :.|:...|.:..|.|      |.|:.|.:...
  Rat   641 FEPWVYSFAYELILQSTRLPLISGFYKLL----SIAVKNARKIKYFEG------VSPKCLKHSPE 695

  Fly   884 DKPTISIVTYFQEYETPIDFPV----DEAIKSAFRALGSNSTDQFYRRQSWEVIRCFLAAFISLD 944
            :....|....|.::...:...:    ||.:.|....:.|...|         :|:..:.|::   
  Rat   696 NTEKHSCFALFAKFGKEVSVKMKQYKDELLASCLTFVLSLPPD---------IIKLDVRAYV--- 748

  Fly   945 DEKHMLLKL-FTHVDFVE---NKIMNWSTFQHKAGNETVRETHQTALIGMLVASATKDLRDSVCP 1005
            ....|..|| .:|:...|   :.:..||....|:..:...:.....|.|.|..|...|...|   
  Rat   749 PALQMAFKLGLSHLPLAEIGLHALKEWSVHIDKSIMQPYYKDIVPCLDGYLNTSTLSDETKS--- 810

  Fly  1006 VMAAVVRHYTMVAIAQQAGPFPQKGYQATHGIDPMILIDALASCMGHEEKELCKPGIACMGII-- 1068
                   |:.:.|:::.|    :||:..    |.:.|:....:....|...|.:..|..:.|:  
  Rat   811 -------HWEVSALSRAA----RKGFNR----DVVKLLKRTRNVTSDEALSLEEIRIRVVQILGS 860

  Fly  1069 --------LDTATNIMGNK-------DRACKL----------PIIQYL------AEKMVSLCYDR 1102
                    |.|||:  |.:       ||..:|          |:| ||      ..::.....||
  Rat   861 LGGQINKNLITATS--GERMKKYVAWDREKRLSFAVPFREMKPVI-YLDVFLPRVTELALSASDR 922

  Fly  1103 PWYSKVGGCQAIQFLCKHMSLRAL-------FQNLFNFLKAFMFVLMDLEGDVSNGAIEI----- 1155
              .:||..|:.:..:...|..||.       ...::...|....||:.|..||.....::     
  Rat   923 --QTKVAACELLHSMVMFMLGRATQMPEGQGLPPMYQLYKHMFPVLLKLACDVDQVTRQLYEPLV 985

  Fly  1156 -----------------TKSYMKSMLEICLTPIN--------ECYKNI-------------DLKD 1182
                             |.:.::::|:..:.|::        :|.:..             :...
  Rat   986 MQLIHWFTNNKKFESQDTVALLEAILDGIVDPVDSTLRDFCGQCVQEFLKWSIKQTTPQQQEKSP 1050

  Fly  1183 LQAKATYEVIHELVRHITSPNTIVREESMVLLKHI-------GTIQSKTVSEVMDPHKDVLA--- 1237
            :.:|:.::.::.|..|   ||...|..:.:...||       |::..:.|.|.:..:.:.||   
  Rat  1051 VNSKSLFKRLYSLALH---PNAFKRLGAALAFNHIYKEFREEGSLVEQFVFEALVTYMESLALAH 1112

  Fly  1238 -------------DII----------------PPKKHLLRHQPANAQIGLMD-----------GN 1262
                         |.|                ..|:.|.|..|....:.|:|           ..
  Rat  1113 ADEKSLGTIQQCCDAIDHLRRIIEKKYISLNKAKKRRLPRGFPPLTSLCLLDLVKWLFAHCGRPQ 1177

  Fly  1263 TFC--TTLE--------------PRLFTID---------LTNTY---------------HKLFFH 1287
            |.|  .::|              |.|:..|         |.||:               .....|
  Rat  1178 TECRHKSIELFYKFVPLLPGNKSPSLWLRDLIKAEGISFLINTFEGGASSSGQPSGILAQPTLLH 1242

  Fly  1288 -----ELLTLSEAEDATLAKLDCYKNVPNLIPLRTSALRALAACHYISDIGYKEKIINIIFKVME 1347
                 .|..:.:..|..||.|:||...                        .:||.:    :|.|
  Rat  1243 LQGPVSLRGMLQWLDHLLAALECYNTF------------------------IEEKTV----QVQE 1279

  Fly  1348 SDKSELQTTAFHCMKHFITGV------TLEKEKVQSAMRPLLLKLGDHRNLS-IPAIKRLSYFTQ 1405
            ...:|:|::....:..|:..:      |:|:........|..::..:..|.| ...:.|:..||.
  Rat  1280 VLGTEVQSSLLKSVAFFLESIATCDARTVEQRFGTGLTGPPSVQEEEKYNYSKCTVLVRIMEFTT 1344

  Fly  1406 IFPQMFNE--KLSEQILQHC-SKIMEIFVS---------------EYKSTSPN--VNFFASSKGG 1450
            .....|.|  ||.|:.|  | :|:|::.|.               :..:..|:  ||...:.:..
  Rat  1345 TLLVTFPEDCKLLEKDL--CNTKLMKVLVKMLCEPLSIGFNIGDVQVMNHLPSICVNLLKALRKS 1407

  Fly  1451 EYEQKIVILIEMFFYISASVKYIEKLCQLVLKTEKNLMIEASSPYREALIKFL-----------Q 1504
            .|..|    :|.......:.:.:|:||.:      ||...|:...|..|:..|           .
  Rat  1408 PYRDK----LETHLKEKVTAQSVEELCAI------NLCSSAACQERTKLLSLLSACKQLHKAGFS 1462

  Fly  1505 RFPTETVDLFLTESL----------------------MIDPQWNRL-----------------FI 1530
            ...:.:....|..|:                      .:||....|                 .:
  Rat  1463 HIISASQSTALNHSIGMRLLSLVYNGIAPAQEKQYLQSLDPSCKSLASGLLELAFAFGGLCEHLV 1527

  Fly  1531 YLLKHETGVSFRAVIKSSRYNNLIHYLNTHTEFPEALKYEIQHQAVLIIFTLMESD--------- 1586
            .||.:.:.:|.:.:..|.|..:..|....::.|||.:..|:.....:.:..|:||.         
  Rat  1528 SLLLNSSMLSTQYLGSSQRNISFSHGEYFYSLFPEVINTELLKSLDVTVSRLLESSSDNPKMVST 1592

  Fly  1587 -----------DQWIPTRQ--DIVDALKNCWQNYLSTLSSEDVLCDLWHLIGKILLHYFSNNTND 1638
                       |:.:...|  .:..|:...|:.           ||.|                 
  Rat  1593 ILNGMLDMSFRDRAVQKHQGLKLATAILQNWRK-----------CDSW----------------- 1629

  Fly  1639 IELLFQLLRALCFRFIPD---------VYFLRDFLQHTVAQSFTVNWKRNAFFYFVENFNN---- 1690
                          :.||         :..|...||.....||..|  .::|......:.|    
  Rat  1630 --------------WAPDSAPESKTTVLSLLAKMLQIDSTLSFDTN--HSSFSEIFTTYANLLAD 1678

  Fly  1691 SFLSEELKAKIITAVIIPCFA-VSFDKGEGNKLIGAPPTPYQEDEKNIVSVFI-------NKVFD 1747
            :.|...||.:.:  :::|.|. |:.|:      :|        |.|:|:..||       :..|.
  Rat  1679 TKLGLHLKGQAV--ILLPFFTRVTEDR------LG--------DLKHILEKFIVLNFPMKSDEFP 1727

  Fly  1748 PD-----------KQYDDAVRIA----LLQLACLLVERASQHIHD-------------------- 1777
            ||           |::.||:.::    ||||...::.|..|||.:                    
  Rat  1728 PDSLKYNNYVDCMKKFLDALELSQSPMLLQLMTDILCREQQHIMEELFQTTFKRIARRSPCVTQL 1792

  Fly  1778 -------------GDANNKRQGNKLRRLMTFAWPCLLSKSSVDPTARYHGHLLLSHI-------- 1821
                         |..::..|....|.|:|..|.|     .:|....:...:::..|        
  Rat  1793 NLLESVYTMFRKGGLLSDVTQAFVDRSLLTLLWHC-----DLDTLKEFFSRIVVEAIDVLKSRFT 1852

  Fly  1822 ---------IARLAIHKKIVLQVFHSLLKGHALEARSIVKQALDVLTPAMPLRMEDGNTM----- 1872
                     |.:...:.|::..::..|||.......|.:.||......|      :||.:     
  Rat  1853 KLNDTFDTQITKKMCYYKMLAVMYSRLLKDDVHSKESKINQAFQGSCVA------EGNELTKTLL 1911

  Fly  1873 -LTH--WTKKI-----IVEEGHAMQQLFH---------ILQLIIRHYKVY----FPVRHQ----L 1912
             |.|  :|:.:     ::|:    ::|:|         ::..:....|.|    |..:.:    :
  Rat  1912 KLCHDAFTENMAGESQLLEK----RRLYHCAAYNCAISLISRVFNELKFYQGFLFSEKPEKNLFI 1972

  Fly  1913 VQHLINYMQRLGFPPTASI--EHKKLAVDLAEVIIKWELHRIKDDRETKTDG-----------TE 1964
            .::||:..:...||....:  |.||..|         |:.:...|......|           ||
  Rat  1973 FENLIDLKRCYTFPIEVEVPMERKKKYV---------EIRKEARDAANGASGNPRYMSSLSYLTE 2028

  Fly  1965 EELIQESSVKRSGIDLVETRKKSFDIIRETTVQGV---GSHTKP----------------DDILR 2010
            ..|.:|.|              .||.  .|.||..   ....||                |||: 
  Rat  2029 SSLSEEMS--------------QFDF--STGVQSYSYSSQDRKPTTGHFQRREHQDSMAQDDII- 2076

  Fly  2011 SIDKSYCDTVLNFLIRLACQVNDPQAPILSPGESLSRRCVMLLKMAMRPEIWPQPFDIKLN---- 2071
                   :..::.|.:..|     .||:.|           |:|...|..|.|:..:..::    
  Rat  2077 -------ELEMDELNQHEC-----MAPMTS-----------LIKHMQRNVIAPKGQEGSISKDLP 2118

  Fly  2072 -WLDKVLATVETPHHNLNNICTGIDFLTFLTTILSPDQLVSIIRPVQR-------GLSLCIIHQN 2128
             |: |.|      |..|.|....::...||..::...:  .:.||..:       .|::|     
  Rat  2119 PWM-KFL------HDKLENASVSLNIRLFLAKLVINTE--EVFRPYAKHWLGPLLQLAVC----- 2169

  Fly  2129 TRIVRLMHMFLTRIMA-------IFPPDTQHKHEDL--DLLYTAVSKMIAENLTSYEKSPQPNAS 2184
            ..|...:|..:..|:|       :..|....|:|.|  .|||..:..:.           .|..:
  Rat  2170 ENIGEGIHYMIVEIVATILSWTGLATPTGVPKYEVLANRLLYFLMKYVF-----------HPKRA 2223

  Fly  2185 SLFGTLMILKA---CTTNNASYIDRILVQFIRVLNHLTRDHINTIG----GNTVISQSPD----- 2237
            .....|.|:|.   |.....|...|::  |.:..|.......|::|    |..|.:..|.     
  Rat  2224 VFRHNLEIIKTLVECWKECLSIPYRLI--FEKFSNKDPNSKDNSVGIQLLGIVVANNLPPYDLKG 2286

  Fly  2238 --SNALPLELLVLSLELIK-NRIFVMSVEIRKLFIGTILVSLIEKSTEV--KIIKCIIKMLDEWI 2297
              ::|:..|.||.::..:| ..::..:.|:    :|.||..:.|:...:  .:.:.::|.|.:..
  Rat  2287 DITSAMYFEALVNNMSFVKYKEVYAAAAEV----LGLILQHVTERKHVIAESVYELVVKQLKQHQ 2347

  Fly  2298 KTKEP-------NVMTQVPSIREK--SAL--LVKLMQNVEKKFTDEIEL--------------NI 2337
            .|.|.       .::...|.:.::  :||  |:.....|.|....|:.|              :.
  Rat  2348 NTMEDKFIVCLNKIVKGFPPLADRFLNALFFLLPKFHGVMKTLCLEVVLCRAEAITGLYLQLKSK 2412

  Fly  2338 QFLEIINFIYRDE---------------ILKQTELTNKLEGAFLNGLRFQNPNVRSKFFEIL--- 2384
            .||:::.  :||:               .||.||| .:|....:..:...:|..|.:.:.||   
  Rat  2413 DFLQVMR--HRDDERQKVCLDIIYKMVAKLKPTEL-RELLNPVVEFVSHPSPTCREQMYNILMWI 2474

  Fly  2385 -----------------------DSSMRRRLHDRL-LYIICSQAWD--------------TIGSH 2411
                                   |..::..:.:.| |.:|....|.              .:.|.
  Rat  2475 HDNYRDPESQMDEDSQEIFKLAKDVLIQGLIDENLGLQLIIRNFWSHETRLPSNTLDRLLALNSL 2539

  Fly  2412 YWIKQCIELLILTANTMMQI-----------------QCSNEQFKIPS----ITSVIPVNSSETQ 2455
            |..|..:..|.|..|.::::                 :|..:::.|..    .::|:.....|||
  Rat  2540 YSPKIEVHFLSLATNFLLEMTRMSPDYLNPIFEHPLSECEFQEYTIDPDWRFRSTVLTPMFIETQ 2604

  Fly  2456 ENSFVSFLSSHSE---------------------SFDIIQTVDDKDDVYD------IDLNAD--- 2490
              :|.|.|::.::                     .|...||..::.. :|      |||.||   
  Rat  2605 --AFPSTLNTQTQEGSPSDRRQKPGQVRATQQQYDFTPTQTSVERSS-FDWLTGSSIDLMADHTV 2666

  Fly  2491 ---------------RKEDCQQI---------------LPNRRV--TLVELVYKQAEFLEANRNI 2523
                           :.|..|::               ||...|  .:....:.|.|.|...|..
  Rat  2667 FSSESLSSSLLFSHKKSEKSQRVSWKSVGPDFGTKKLGLPGDEVDNQVKSGTHSQTEILRLRRRF 2731

  Fly  2524 RTDQ----MLVATSQLC---------------------------HIDTQLAQSVWLSMFPRIWSI 2557
            ..||    :|.|...|.                           |.|....|....|:...:.::
  Rat  2732 LKDQEKLSLLYAKRGLMEQKLEKDIKSELKMKQDAQVVLYRSYRHGDLPDIQIQHSSLITPLQAV 2796

  Fly  2558 FTEDQRCNITKELIPFLSSGTNVNQKDCH----PSTLNTFVESLTK------CAPPIYIPPNLLA 2612
            ..:|.  .|.|:|...|.||.   .|:.|    .|..|..:::|.:      ....::.||.:..
  Rat  2797 AQKDP--IIAKQLFSSLFSGI---LKEMHKFRTTSEKNIIIQNLLQDFNRFLNTTFLFFPPFVSC 2856

  Fly  2613 YLGKSHNLWHRAILVLEDMAVNQS-MQSKDIDGGENQFSDL----------------------DV 2654
            .  :..:..|..:|.|:..||... :.|....||.....:.                      ||
  Rat  2857 I--QEISCQHVDLLTLDPAAVRVGCLASLQQPGGIRLLEEALLHLLPKEPPTKRIRGKTCLPPDV 2919

  Fly  2655 QQSNNIFDSLSKMYSSMHEEDLWAGLWLKFAHYPETNIAVSYE-QMGFFEEAQGAYDLAMTKFKQ 2718
            .:    :..|:|:|.|:.|.|:..|::       .:.:....: |.....||:..|..|...:|:
  Rat  2920 LR----WMELAKLYRSIGEYDVLHGIF-------SSELGTKQDTQNALLAEARSDYFQAANLYKE 2973

  Fly  2719 DLS--NGVVNTYVNSELLLWENHWMRCAKELNQWDILLDYAQT-NKDKNMFLILESSWRVPDWNL 2780
            .|:  ..:......:|...||...:.|...|:||. .|:|..| |......|.|...|..|.:  
  Rat  2974 ALNKLEWLDGEPTEAEKEFWEMASLDCYNNLSQWK-ELEYRSTVNIGSENSLDLSKMWSKPFY-- 3035

  Fly  2781 MKIALAKTEQCYLKH-YGFKINL------------------------------YKGYLSILHQEE 2814
                    ::.||.: ...|:.|                              |...||:|:..:
  Rat  3036 --------QETYLPYVIRSKLKLLLQGEDNQSLLTFVDEAMHKELQQMVLELQYSQELSLLYILQ 3092

  Fly  2815 RQTGNIERYVEIASSLCIREWRRLPNIVSHIHLPYLQASQQIMELHEASQI---HQGLAQSRNNS 2876
            ........|::.|..:.::.:..:..::....|..||:.|.:.|:.|....   |..|     :|
  Rat  3093 DDIDRATYYIKNAIQIFMQNYSSIDVLLYRSRLAKLQSVQTLAEIEEFLNFIRKHGDL-----SS 3152

  Fly  2877 LHDMKAIVKTWRNRLP-IISDDLSHWSDIFT---------------------------------- 2906
            |..::.::|||.:|.| .::|.:..|.||.|                                  
  Rat  3153 LGPLRRLLKTWTSRYPDTVTDPMHIWDDIITNRCFFLSKIEERLTVSPGDHSMSVDEDEDSFARE 3217

  Fly  2907 ---------------------------WRQHHYQIITQ-----HLEQQSDQGSTMLGVHASAQAI 2939
                                       |:|:::.:..:     |.|.:..:...|..:|:..|. 
  Rat  3218 GSEPKEDAHHILQSCRFTMKMKMIESSWKQNNFSLSMKLLKEMHKESKIRESWRMQWIHSFCQL- 3281

  Fly  2940 ISFGKIARKHNLTGVCQETLSRIYTIPSVPIVD------------CFQKIRQQVKCYLQMPSTSG 2992
                ...|.|..:.. ::.|:.:.||..:...|            |.|.|.....|.:...:.|.
  Rat  3282 ----NHCRSHTQSPQ-EQVLTMLKTITLLDESDISNYLNKNIQAFCDQNILLGTSCRIMADALSR 3341

  Fly  2993 KNEINEALEVIESTNLKYFTGE--MNAEFYALKGLLLAQIGRSEEAGKSFSVAAQLHDGLTKAWA 3055
            :......||..::.::...:|.  .|.| ..:.||.       :.|....|:|.|..:..|:. :
  Rat  3342 EPACLSGLEKSKTESIFALSGSNTENTE-RVISGLY-------QRAFHHLSMAVQSAEEETQL-S 3397

  Fly  3056 MWGD---------YMEQIFLKERKITLAVDALICYLQASRNQIESKTRKYIAKVLWFLSYDNNTK 3111
            .||.         ||..:...::::....::.....|....::|......:.|:|..|..:::..
  Rat  3398 CWGHEAAAERAHAYMTLVGFCDQQLRKVEESASTASQKISTELEGYPALVVEKMLRALKLNSSEA 3462

  Fly  3112 IL----------------ISTLEKHVAGIPPSYWLPWIPQLLCCLEQFEGDVILNLLSQIGRLYP 3160
            .|                ::.:.|.::.||...::.||..::..|::.|...:.:.:.:|...||
  Rat  3463 RLKFPRLLQIIEQYPEETVNIIIKEISSIPCWQFIGWIGHMVALLDKEEAIAVQHTVEEIADNYP 3527

  Fly  3161 QAVYFPIRTLYLTLKIEQREKHKTAEQAVKSSCSNIDGTTLSFGRGASHGNIPSINPIKATPPMW 3225
            ||:.:|.                    .:.|...:...|:      :.|.|...:..||      
  Rat  3528 QAIIYPF--------------------IISSESYSFQNTS------SGHNNKAFVERIK------ 3560

  Fly  3226 RCSKVMQLQREVHPTILSSLEGIVDQMVWFRESWTEEVLRQL------RQGLIKCYAIAFEKRDT 3284
              ||:.  |..|....:::|:.:.:..:.|:: |..:...:|      ::.:.|.|...:.....
  Rat  3561 --SKLD--QGGVIQGFINALDQLSNPDMLFKD-WVNDTKDELGKNPVNKKNIEKLYERMYAALGD 3620

  Fly  3285 VQHSTITPHTLHFVKKLGSTFGIGIENVPGSVTSSISNSAA---SESLARRAQVTFQDPVFQKMK 3346
            .:...:.|....|::..|..|           ..|..|..:   :..|.....:|  |.:|.:|:
  Rat  3621 FRAPGLGPFRRKFIQTFGKEF-----------VKSFGNGGSKLLTMKLDEFRNIT--DSLFVRMR 3672

  Fly  3347 EQFTNDFDFSKPGAMKLHNLISKLKTWIKVLETKVKKLPTSFLIEDKCRFLSNFSQKTAEVELPG 3411
            :      |...||.:|      :...|                       :|.|:.| :|:|:||
  Rat  3673 K------DSKLPGNLK------EYSPW-----------------------MSEFTVK-SELEIPG 3701

  Fly  3412 EL---LIPLSSHYYVRIARFMPRVEIVQKNNTAARRLYIRGTNGKIYPYLVVLDSGLGDARREER 3473
            :.   ..|| ..|:|||:.|..||: |..:....:|:.|||.:.|.||:||   .|..|.|:::|
  Rat  3702 QYDGKSKPL-PEYHVRISGFDERVK-VMVSLRKPKRIVIRGHDEKEYPFLV---KGGEDLRQDQR 3761

  Fly  3474 VLQLKRMLNYYLEKQKETSRRFLNITVPRVVPISPQMRLAEDNPNSISLLK-IFKKCCQSMQVDY 3537
            :.||..::|..|.:....|:|.:.:...||||::.::.|.|...|:::|.. :.....|..:|.|
  Rat  3762 IEQLFEVMNAILSQDAACSQRNMQLRTYRVVPMTSRLGLIEWIENTMTLKDLLLSNMSQEEKVAY 3826

  Fly  3538 D----MPIVKYYDRLSEVQARGTPTTHTLLREIFSEIQWT-----------MVPKTLLKHWALKT 3587
            |    .||..|.|.|.:|..|.....:||:   :|....|           .||..|||...:|.
  Rat  3827 DSDSKAPIYDYRDWLIKVSGRSDVKGYTLM---YSRANRTETVTAFRRRENKVPADLLKRAFVKM 3888

  Fly  3588 FLAATDFWHFRKMLTLQLALAFLCEHALNLTRLNADMMYLHQDSGLMNISYFKFDVNDDKCQLNQ 3652
            ..:...|...|.......||..:....|.:...:.:...:..::|    |....|.........|
  Rat  3889 STSPEAFLALRSHFASSHALLCISHWLLGIGDRHLNNFMVAMETG----SVIGIDFGHAFGSATQ 3949

  Fly  3653 HRPV----PFRLTPNVGEFITHFGITGPLSAAIVATARCF---------------IQPNYKLSSI 3698
            ..|:    |||||......:.....||.:...:|...|.|               .:|::.....
  Rat  3950 FLPIPELMPFRLTRQFISLMLPMKETGLVCTVMVHALRAFRSCAGLLTDTMEVFVKEPSFDWKGF 4014

  Fly  3699 LQTILR------DEIIALQKKGFRECKLIEGSEDRYSDGNCMEHSVNIVNSAV------------ 3745
            .||:||      .||...:|..:.:.|:      ||:     :..:...|.||            
  Rat  4015 EQTMLRKGGSWIQEINVTEKNWYPQHKI------RYA-----KRKLAGANPAVITCDELRLGHEA 4068

  Fly  3746 ------DIIMTRFNK------------ISYFDSIENKKISVLVQSATNIDNLCRMDPAWHPWL 3790
                  .:.:.|.||            :|     |..::..||..||:.:.|.|....|.||:
  Rat  4069 SPAFRSYVAVARGNKDYNIRAQEPESRLS-----EETQVKCLVDQATDPNILGRTWEGWEPWM 4126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nipped-ANP_001097192.2 FRB_dom <2568..3790 CDD:331513 278/1481 (19%)
FAT 2767..3102 CDD:308074 71/458 (16%)
PIKK_TRRAP 3425..3712 CDD:270707 80/327 (24%)
PrkdcNP_001101797.2 NUC194 1813..2196 CDD:369725 80/460 (17%)
FAT 3087..3471 CDD:367004 63/403 (16%)
TEL1 <3457..4013 CDD:227365 132/653 (20%)
PIKKc_DNA-PK 3717..4012 CDD:270716 74/305 (24%)
FATC 4096..4126 CDD:367005 10/34 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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