DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nipped-A and mei-41

DIOPT Version :9

Sequence 1:NP_001097192.2 Gene:Nipped-A / 35483 FlyBaseID:FBgn0053554 Length:3790 Species:Drosophila melanogaster
Sequence 2:NP_523369.2 Gene:mei-41 / 32608 FlyBaseID:FBgn0004367 Length:2517 Species:Drosophila melanogaster


Alignment Length:3165 Identity:560/3165 - (17%)
Similarity:1000/3165 - (31%) Gaps:1148/3165 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1106 SKVGGCQAI--QFLCKHMSL--RALFQNLFN-FLKAFMFVLMD------LEGDVSNGAIEITKSY 1159
            |...|..::  ..||:..||  .:|.:.|.| |...|:..|::      .|...|:..|.:.:..
  Fly    21 SNFSGVYSVIEDILCQEPSLISCSLVRELHNKFQDTFLLWLLNKLAKCLSESPDSSECINLQRKI 85

  Fly  1160 MKSMLEICLTPINECYKNIDLKDLQAKATYEVIHELVRHITSPN--TIVREESMVLLKHIGTIQS 1222
            :.|    |      |..:..|.:....|..|.|.|....::|.:  .:..|....:...|.....
  Fly    86 LSS----C------CSNHPKLFERLVLAYVEAIEETHLQLSSLDLGQLSNERKPAITVRIFRCDV 140

  Fly  1223 KTVSEVMDPHKDVLADIIPP-------KKHLLRHQPANAQIG-LMDGNTFCTTLEPRLFTIDLTN 1279
            :.:.| .||| ..:.||..|       .|.||........|| ...|:.|..:|           
  Fly   141 ECLQE-FDPH-CAIEDIKVPLEQADMYAKSLLEVLQHAHHIGYATHGDIFSGSL----------- 192

  Fly  1280 TYHKLFFHE-LLTLSEAE-DATLAKLDCYKNVPNLIPLRTSALRALAACHYIS--DIGYKEKIIN 1340
                   |: ||.|.|.: |..||.|:...||          ||:.:|..:|:  |:|:..::  
  Fly   193 -------HQALLILKECDMDTKLASLNYCHNV----------LRSQSASSWITNPDVGHYAQL-- 238

  Fly  1341 IIFKVMESDKSELQTTA-----------FHCMKHFITGVTLEKEKVQSAMRPLLLKLGDHRNLSI 1394
                       .|:.||           ..||       |.::.|..:....|||::...|  :.
  Fly   239 -----------TLEATAIMWSAVAKWLDMGCM-------TRQELKRLNITTKLLLEVLHMR--AR 283

  Fly  1395 PAIKRLSYFTQIFPQMFNE--------KLSEQILQHCSKIMEIFVSEYKSTSPNVNFFASSKGGE 1451
            || ..|.|.      :.||        :|.:.:|:..|..::                     |:
  Fly   284 PA-HHLGYL------LLNEILSLPTAIELDDGLLETLSSYIQ---------------------GQ 320

  Fly  1452 YEQKIVILIEMFFYISASVKYIEKLCQLVLKTEKNLMIEASSPYREALIKFLQRFPTETVDL--- 1513
            .|..:|.|              |:|..|     :.||:.....:...|:..|.....:..::   
  Fly   321 LEHSVVPL--------------EQLVHL-----QQLMLSHWHCHPTHLVPILALMGLKQTEMRSG 366

  Fly  1514 ---FLTESLMIDPQWNRLFIYLLKHETGVSFRAVIKSSRYNNLIHYLNTHTEFPEALKYEIQHQ- 1574
               .||:||          :.:||.|.       :.|..:..||..|....:..:.:..:.||: 
  Fly   367 VVQVLTQSL----------VEILKKEE-------VLSKDWQKLIAILRGFKQLEKLILSQSQHKI 414

  Fly  1575 ---------AVLIIFTLMESDDQWIPTRQDIVDALKNCWQNYLSTLSSEDVLC--DLWHL---IG 1625
                     :||.:          :|.:.:|:......|.|....|...:..|  |..|:   |.
  Fly   415 AEHEGHIDSSVLAM----------LPLQCEIIKVADTNWNNLSMQLVELESKCSADRRHIHLEIC 469

  Fly  1626 KILL------HYFSNNTNDIELLFQLLRALCFRFIPDVYFLRDFLQHTVAQSFTVNWKRNAFFYF 1684
            .:|:      |:....|.. :||..|.|.|...::..:........||..|||           :
  Fly   470 SLLMQITFIRHFLKTQTQH-QLLAILQRHLKLSYLCAIRLETPSSVHTQMQSF-----------Y 522

  Fly  1685 VENFNNSFLSEELKAKIITAVIIPCFAVSFDKGEGNKLIGAPPTPYQE------------DEKNI 1737
            .:.:...|.|||.: :|..:.:...:...|.|.|  :|:.|.||....            .:...
  Fly   523 AQQYMRLFQSEETQ-EIFCSNLPQLYISGFIKPE--QLMKALPTINNRSGRAQVIRLLLCSQPGK 584

  Fly  1738 VSVFINKVFDPDKQYDDAVRIALLQLACLLVERASQHIHDGD---ANNKRQGNKLRRLMTFAWPC 1799
            :|||  ||.|..:.|....|....:|..:.:.:..|.:...|   .|.:...|.|  |....:.|
  Fly   585 LSVF--KVKDRIELYCPKCRPLPKKLPGIYLGKCKQQLPCPDFSSTNLEMIANDL--LFYPDFEC 645

  Fly  1800 L-----------------------LSKSSVDPTARYHGHLLLSHIIARLAIHK--------KIVL 1833
            :                       |.|.||.         ::..:::.:.:..        .:||
  Fly   646 IAQHLDLLCFEPNVILGLLRETEALQKVSVK---------VIGQLVSAMRVRSPEFLEQLANLVL 701

  Fly  1834 QVFHSLL-----KGHALEARSIVKQALDVLTPAMPLRMEDGNTMLTHWTKKIIVEEGHAMQQLFH 1893
            ....::|     :.:.|:.||:    |:|||..  ..|||....|.||.|               
  Fly   702 AAIKAMLAKPLTEQNVLQQRSM----LNVLTAI--AHMEDNEIWLFHWFK--------------- 745

  Fly  1894 ILQLIIRHYKVYFPVRHQLVQHLINYMQRLGFPPTASIEHKKLAVDLAEV--------IIKWELH 1950
                     ..:|.:.|                 |.|:..::..:...|:        |..|..:
  Fly   746 ---------MTFFFLVH-----------------TRSLVAQEAVLAATEMCASQGLQTIHLWNWY 784

  Fly  1951 RIKDDRETKTDGTEEELIQESSVKRSGIDLVETRKKSFDIIRETTVQGVGSHTKPDDILRSIDKS 2015
                                   ||..:||.                                  
  Fly   785 -----------------------KRDALDLT---------------------------------- 792

  Fly  2016 YCDTVLNFLIRLACQVNDPQAPILSPGESLSRRCVMLLKMAMRPEIWPQPFDIKLNWLDKVLATV 2080
                     :|||..|      .|..|...:|....|.||.....:  |.|..|.:   ::|..:
  Fly   793 ---------VRLALNV------YLLDGVRFTRSLRALTKMLGFTCV--QEFTCKYH---RLLTAM 837

  Fly  2081 ETPHHNLNNICTGIDFLTFLTTILSPDQLVSIIRPVQRGLSLCIIHQNTRIVRLMHMFLTRIMAI 2145
            ..||..:|.:|.|:              ||.|.:.:|:.:.........||  ..|:|||.    
  Fly   838 VLPHCIVNPLCKGV--------------LVLIAKQMQKHIGTLFSISFLRI--YTHVFLTE---- 882

  Fly  2146 FPPDTQHKHEDL----------DLLYTAVSKMIAENLTSYEKSP-------QPNASSLFGTLMIL 2193
             .|:..:...:|          .|:...|.:.:||.|..:.::|       |.......|:|..|
  Fly   883 -EPELANSCIELVVSCTQSSLQQLMNADVKQTVAELLIYFNRNPTFVMRSFQSLLQLSIGSLEEL 946

  Fly  2194 KACTTNNASYIDRILVQFIRVLNHLTRDHINTIGGNTVISQSPDSNALPLELLVLSLELIKNRIF 2258
            .: .|.||.:.:.|..:|:.|:.:.          .:.:|:......|..|.|....::::   |
  Fly   947 SS-QTANAEFANFIAERFLGVITYF----------ESCLSEPSFEKPLKEETLYSLGQIMR---F 997

  Fly  2259 VMSVEIRKLFIGTI-LVSLIEKSTEVKIIKCIIKMLDEWIKTKEPNVMTQVPSIREKSALLVKLM 2322
            |.|..:.:.....| ::|.:....|.::.:..:|:   |      ::...|.:::|....|.:::
  Fly   998 VGSQHVTQFRFKIIAMLSFVHTLQEPRLQRICLKI---W------HIFLHVVNVQELGPSLGRIV 1053

  Fly  2323 QNVEKKFTDEIELNIQFLEIINFIYRDEILKQTELTNKLEGAFLNGLRF--QNPNVRSKFFEILD 2385
            ..::....|.     :.::.:|.:|...||:...:.    |.|:..|.|  :..||...    :.
  Fly  1054 ATLQPLLADN-----ESVKQVNDLYEFIILRNASML----GTFITDLYFLDRMENVSPS----IQ 1105

  Fly  2386 SSMRRR------------------LHDRLLYIICSQAWDTIGSHYWIKQCIELLILTANTMMQIQ 2432
            ..:||.                  |.|:|.::          ..:...:|:::.:..      :|
  Fly  1106 KCIRRHTAHLDLKGLAEEENQSPPLVDQLRFL----------QKHITDECLQVRVYA------LQ 1154

  Fly  2433 CSNEQF--KIPSITSVIPVNSSETQENSFVSFLSSHSESFDIIQTVDDKDDVYDIDLNADRKEDC 2495
            ...:.|  :.|.:.|.|            :|.|........|:..           |.|..:.|.
  Fly  1155 HLGDLFGRRRPKLNSTI------------LSELPLEPMLEQIVNV-----------LMAGCQHDD 1196

  Fly  2496 QQILPNRRVTLVELVYKQAEFLEANRNIRTDQML-----------VATSQLC----------HID 2539
            .|:.......|.||....|.:|.:|.|..:.|.|           :|.:.||          |:|
  Fly  1197 SQLQMASAKCLGELGAIDASYLPSNYNFASPQHLPLNILSDDFAVLALTSLCRGYQFQQNTKHVD 1261

  Fly  2540 T------------------QLAQSVWLS--------MFPRIWSIFT---EDQRC----------- 2564
            :                  |....:|.|        |.|.:.|.:|   ....|           
  Fly  1262 SFSLAIQETLAICGISPKEQKKVQLWQSLPARMRQLMEPMLHSCYTCVHRPSTCLQQPLFGSHYS 1326

  Fly  2565 -NITKE--------LIPFL-SSGTN---VNQKDC---HPSTLNTF-----VESLTKCAPPIYIPP 2608
             |..:|        ||.:| |||..   .:.|.|   ..:.|:||     :.:|.:|...     
  Fly  1327 HNYYEEWAFLWASRLIDYLPSSGRRHLLSSYKPCIKRDSNMLSTFYPYILLHALLECTTE----- 1386

  Fly  2609 NLLAYLGKSHNLWHRAILVLEDMAVNQSMQ--SKDIDG-------GENQFSDLDVQQSNNIFDSL 2664
                         .|..:..|.|||.|:.:  |..:.|       .||.|...:.::.......|
  Fly  1387 -------------QRNHIQEEFMAVLQANEESSSSVRGRQELGAIKENAFKQFESRKYAAGIKPL 1438

  Fly  2665 SKMYSSMHEED--------------------LWAGLWLKF------AHYPET------------N 2691
            :....|..:||                    .|...|.:.      ...|||            |
  Fly  1439 ASTLVSDRKEDSSRVPRLAGKLCAELLDFLQRWLREWQRIHGRSTGGKPPETIDSNYRKIHEFLN 1503

  Fly  2692 I------------------AVSY----------------EQMGFFEEAQG--------------- 2707
            :                  |:||                ||..|..|..|               
  Fly  1504 LIPKLLVSRASYNCGEYARALSYLESYLEEGEDKSQRLLEQFTFLVEVYGSLRDPDSVEGAVQVR 1568

  Fly  2708 AYDLAMTKFKQDLSNGVVNTYVNSELLLWENHWMRCAKELNQWDILLDYAQ-------------- 2758
            :||:::|   ||:   :||..|.                 .|.|::..|.|              
  Fly  1569 SYDMSVT---QDI---LVNRLVE-----------------RQQDMITSYEQLLSSTDQMQPDHVR 1610

  Fly  2759 -------TNKDKNMFLILESSWRVPDWNLMKIALAKTEQCYLKHYGFKINLYKGYLSILHQEERQ 2816
                   .:..|...||.:..|:       :::...::||:.:   .|..|.....|....||.|
  Fly  1611 AMIDAYLRDTPKTAQLIADGLWQ-------RLSDRYSDQCFAE---CKSELLWRLGSYDEMEELQ 1665

  Fly  2817 TG--------------NIERYVEIASSL------CIREWRRLPNIVSHIHLPYLQASQQIMELHE 2861
            :.              .:...:|..|.|      .:.|.|....:..|   .|..|...:::||.
  Fly  1666 SNWPAQCSQGCLKLRRPLTTRIEFDSLLDGMRESVLEELRSCSAVQQH---SYANAYDAVLKLHL 1727

  Fly  2862 ASQIH------QGLAQSRNNSLHD--MKAIVKTWRNRLPIISDDLSHWSDIFTWRQHHYQIITQH 2918
            ..::|      :.|.|.|:....:  ||.....|:.||.|:...:.....|:::|::   |:.:.
  Fly  1728 VHELHCSQELVEKLEQDRDEDNQEKLMKNYFDDWQYRLQIVQPQVRIQESIYSFRRN---ILAEL 1789

  Fly  2919 LEQQSDQGSTMLGVHA--------SAQAIISFGKIARKHNLTGVCQETLSRIYTI------PSVP 2969
            ..:.:|:...:..:..        |||...:.|::.|            :::|.:      ||..
  Fly  1790 QRRLTDRNHLLPHLKTELARIWLNSAQINRNAGQLQR------------AQLYILKAAEYQPSGL 1842

  Fly  2970 IVDCFQKIRQQVKCYLQMPSTSGKNEINEALEVIES---TNLKYFTGEMNAEFYALKGLLLAQIG 3031
            .::..:.:.|:....:.|      |.:.|.|.::.|   .|:|....|....|:.          
  Fly  1843 FIERAKLLWQKGDQVMAM------NYLEEQLSIMRSGCQGNVKQLAAEQRHLFFR---------- 1891

  Fly  3032 RSEEAGKSFSVAAQLHDGLTKAWAMWGDYMEQIFLKERKITLAVDALICYLQ---ASRNQIES-- 3091
                                      |.|::.::..| .:.|..||::.|.|   |...|.||  
  Fly  1892 --------------------------GKYLQAVYSAE-SMHLCADAVLKYFQEAIAVHRQSESCH 1929

  Fly  3092 -KTRKYIAKVLWFLSYDNNTKILISTLEKHVAG-IPPSYWLPWIPQLLCCLEQFEGDVILNLLSQ 3154
             :..:::.|:                ||....| ..|:.            ||  .|:::|::..
  Fly  1930 VQMAQFLEKI----------------LEARQGGKSEPTG------------EQ--DDMLINVMVN 1964

  Fly  3155 IGRLYPQAVYFPIRTLY------LTLKIEQREKHKTAEQAVK-----SSCSNIDGTTLSFGRGAS 3208
                |.:::.:....:|      ::|.::..|.....||..|     ::|.....|.:.:     
  Fly  1965 ----YAKSLRYGSEHVYQSMPRLISLWLDTTESSTNTEQVKKMNDLLTNCCTALPTAVFY----- 2020

  Fly  3209 HGNIPSINPIKATPPMWRCSKVMQLQREVHPT--ILSSLEGIVDQMVWFRESWTEEVLRQLRQGL 3271
              .:.|                ..|.|..||.  :.:.|..::.::|   |::.::.|..|    
  Fly  2021 --TVYS----------------QMLSRLCHPVNDVFTVLRNVIIKLV---EAYPQQSLWML---- 2060

  Fly  3272 IKCYAIAFEKRDTVQHSTITPHTLHFVKKLGSTFGIGIENVPGSVTSSISNSAASESLARRAQV- 3335
                               .||                           ..||.:..:.|...| 
  Fly  2061 -------------------LPH---------------------------FKSAKAHRIKRCKLVL 2079

  Fly  3336 ---TFQDPVFQKMKEQFTNDFDFSKPGAMKLHNLISKLKTWIKV--LETKVKKLPTSFLIEDKCR 3395
               ..|:..|||:.:    ||:......|.|.|....|....|:  |:|::.||         |:
  Fly  2080 TDSRLQNSTFQKLLQ----DFNSLTERLMDLTNKEVTLDRTYKLSDLDTRLSKL---------CK 2131

  Fly  3396 FLSNFSQKTAEVELPGELLIPLSS---------------------HYYVRIARFMPRVEIVQKNN 3439
             ...|||.....|...:..:||:|                     :..:.|:.|...| ::.::.
  Fly  2132 -QPEFSQILLPFEKYMQPTLPLNSDSNSSEGSHLPANQSTVNWFPYQQIYISGFQESV-LILRSA 2194

  Fly  3440 TAARRLYIRGTNGKIYPYLVVLDSGLGDARREERVLQLKRMLNYYLEKQKETSRRFLNITVPRVV 3504
            ...::|.||.::||.|..||   ....|.||:.|:::...::..||.:.....:|.|:|....|:
  Fly  2195 AKPKKLTIRCSDGKDYDVLV---KPKDDLRRDARLMEFNGLVKRYLHQDAPARQRRLHIRTYAVL 2256

  Fly  3505 PISPQMRLAEDNPNSISLLKIFKKCCQSMQVDYDMPIVKYYDR-----LSEVQARGTPTTHTL-- 3562
            |.:.:..|.|..||    |..::..|.::          |..|     ..::|:...|...::  
  Fly  2257 PFNEECGLVEWLPN----LASYRSICMNL----------YAQRRLVMSTRQLQSLAVPLHESIER 2307

  Fly  3563 LREIFSEIQWTMVP--KTLLKHWALKTFLAATDFWHFRKMLTLQLALAFLCEHALNL-TRLNADM 3624
            .||:|::   .:||  ..:.:.|..:.|.....::..|......:|:..:..:.|.| .|...::
  Fly  2308 KREVFTK---QLVPAHPPVFQEWLRQRFATPHSWYEARNTYIRTVAVMSMVGYILGLGDRHGENI 2369

  Fly  3625 MYLHQDSGLMNISYFKFDVNDDKCQLNQ------HRPVPFRLTPNVGEFITHFGITGPLSAAIVA 3683
            ::...:...:::        |..|..||      ...||||||.|:...:...|:.|........
  Fly  2370 LFAEGNGDAVHV--------DFNCLFNQGELLPYPEVVPFRLTHNMIVAMGPLGVEGSFRKCCEI 2426

  Fly  3684 TARCFIQPNYKLSSILQTILRDEIIALQKKGFRECKL---IEGSEDRYSDGNCMEHSVNIVNSAV 3745
            |.|...|.:..|.|||:..:.| :.|..:||....|:   ::...||. .|:......|.:..:.
  Fly  2427 TLRLLKQESKTLMSILRPFVYD-VGAQTRKGAATAKITKDVQRIADRL-QGHVKRQQANSIPLST 2489

  Fly  3746 DIIMTRFNKISYFDSIENKKISVLVQSATNIDNLCRMDPAWHPWL 3790
            :                 .:::.|:..||.:|||..|...|..:|
  Fly  2490 E-----------------GQVNFLINEATKVDNLASMYIGWGAFL 2517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nipped-ANP_001097192.2 FRB_dom <2568..3790 CDD:331513 259/1469 (18%)
FAT 2767..3102 CDD:308074 66/385 (17%)
PIKK_TRRAP 3425..3712 CDD:270707 66/302 (22%)
mei-41NP_523369.2 UME 955..1060 CDD:214825 18/126 (14%)
FAT 1653..1985 CDD:280429 69/426 (16%)
PIKKc_ATR 2181..2448 CDD:270625 64/295 (22%)
FATC 2486..2517 CDD:280430 8/47 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464452
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11139
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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