DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atf6 and atf-6

DIOPT Version :9

Sequence 1:NP_995745.1 Gene:Atf6 / 35480 FlyBaseID:FBgn0033010 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_510094.1 Gene:atf-6 / 181405 WormBaseID:WBGene00000222 Length:589 Species:Caenorhabditis elegans


Alignment Length:696 Identity:132/696 - (18%)
Similarity:251/696 - (36%) Gaps:211/696 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 FKRNVNDNNFQLDLTNSRNDLPE----------------PNSSPTRSLNRSNVN----------- 127
            |...|:::||. ||.::.|..|:                ..|:.:.|...|:.|           
 Worm     3 FDNTVHESNFD-DLLHNPNFPPQFDQLELDSLLYGTDESQESTSSSSFGFSDQNAGFRSRDGGSL 66

  Fly   128 GCSNEEAVYPLLV------DSDKFDPFFEPAKVRSPNKEFNSTISNLSDIKNELPETSQDLGFNS 186
            |.|:.::..||..      |.:.:|..|:.   |||.:.|.....:.......:.|.:.:.    
 Worm    67 GDSSSDSSPPLSCANFTENDQEMWDFGFQS---RSPFENFEQQFGSPYQDDEVIAEPTNEF---- 124

  Fly   187 YNTSRNNSTLTKSWPINTELNLDNQVPKTVLPLSRTIYLP--------------SHDYKGLLPTV 237
            .|.........|..|:. :..:...:||...|:.|.:..|              ...|:.:.|.:
 Worm   125 MNARYLREEPAKHLPMQ-QKRIITILPKQSQPVKRIVSRPIQKVYRVKESPGSQQQTYRVVQPLM 188

  Fly   238 KCNGDRTLK--KNVNVRSKISNIVIKKKNATFIQSLKESTPSH-----TMDDK----IYKKYQ-R 290
            ......|.:  |.:.....:..|.::.|:...::.:.|. |.:     |:|.|    ::...| |
 Worm   189 PSPSQATQRQIKQMYYNEPVQEIHMQPKSGPLVRQVSEE-PRYVPIAPTVDIKAEPQVFTSEQNR 252

  Fly   291 MIKNRESASLSRKKRKEYVVSLETRINKLEKECDSLKAENITLRDQIFLLATSCQRESGNANGLL 355
            .|:||..|..||.::||....::..:.:|.:|.:.|:.||..|:.::...               
 Worm   253 KIRNRMYAQASRMRKKEADEHMKMNLQELLQENEILRTENAALKQRLAFF--------------- 302

  Fly   356 HNYSGSERSE------NKNGRFTSKAKHCNKNNTTATIKKNVAILFAMAFVVSLNAGNFQKYLNI 414
                  |..|      ...||        |:.........:|.::|.:..|:|        ..|:
 Worm   303 ------EHEEPVVEVPQPFGR--------NQKKKRIIAAGSVLMMFGLFAVIS--------PFNV 345

  Fly   415 PNNLEGKSEIEPVGKQLSM---SNRRLLWADSEEEYK--EKNNLSTFLSGKQKEPSLYFLNS--- 471
            .|||...::|..:..:.||   ..|.:.:.||....|  .:..:..:.:..|.:..:|.||:   
 Worm   346 DNNLNINNQIMAISNETSMVARHGRVITYEDSAPVAKIPTQQPIHNYPNSTQNDCDMYKLNATET 410

  Fly   472 -GIRNH-----KINSFENITKNVSHTYSYNEPPPLTYLSTRNCINRCRSHNGSSNQSKYFMLAQN 530
             .:.|.     :::||:|:              |:                              
 Worm   411 IRVNNDIERWVQVHSFDNV--------------PM------------------------------ 431

  Fly   531 LHKWISGTLNVSNFSKEKEDSNGFEFFNNYFEEKRDIHIKHEKRKMFIDLNDYTSVLPEKQQ--- 592
              |:..|.||       ||....|    ||.::.:...: :..:.:.:......:.|..:::   
 Worm   432 --KFSGGLLN-------KEAMRKF----NYAQKVKPASV-YGPQTLAVQKKSEQAALRSRERTWK 482

  Fly   593 -----------KLNNTKSFENMREQINVISKIER-RDDTFYVFSFNMDHALLPALSYNSSYRPKL 645
                       :|:|.| .:..|:.|:.|:.|.| :.||.|:.:. .|:.|||:|...::..|||
 Worm   483 QLDLLKTGNNIQLDNEK-IQRKRQDIDKIASIVRQKGDTLYIMTL-QDYVLLPSLIKGANSVPKL 545

  Fly   646 SLVLPLENPGINGKMK----MIQVDCEVFNTKDFEVSH----HLFP 683
            ||:||  :..:||.::    :::|||||..|....:|:    :|.|
 Worm   546 SLLLP--SVPMNGTLQDQYTLLRVDCEVTGTGQLTLSNKQLSYLMP 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atf6NP_995745.1 bZIP_ATF6 287..338 CDD:269848 16/51 (31%)
coiled coil 287..338 CDD:269848 16/51 (31%)
atf-6NP_510094.1 bZIP 250..300 CDD:269834 16/49 (33%)
coiled coil 250..300 CDD:269834 16/49 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158863
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4343
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003511
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106428
Panther 1 1.100 - - LDO PTHR46164
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3813
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.770

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