DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atf6 and atf6

DIOPT Version :10

Sequence 1:NP_995745.1 Gene:Atf6 / 35480 FlyBaseID:FBgn0033010 Length:741 Species:Drosophila melanogaster
Sequence 2:XP_002933826.2 Gene:atf6 / 100498199 XenbaseID:XB-GENE-983814 Length:644 Species:Xenopus tropicalis


Alignment Length:749 Identity:181/749 - (24%)
Similarity:280/749 - (37%) Gaps:216/749 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NSSAFYNDTSL-DLSELIPDLQKEAFGLHFSSNPITSEFSLS---------------------SP 75
            :||.|...|.| |:..:.||.:.:.:|.||.:    .:|::.                     ||
 Frog    30 DSSLFEELTDLVDVDNMFPDEKNDLYGNHFDN----LDFNMDLMAWNTCPWDVPGDVIKLDPLSP 90

  Fly    76 ISGLKQIPS-------ACSGEFKRNVND-NNFQL-------DLTNSRNDLPEPNSSPTRSLNRSN 125
            .|.:..:||       |.|.:|....:| ::.||       |.:.|......|...|..|..:: 
 Frog    91 PSSISSVPSPSSVDSLASSSQFVPEDSDVSSSQLSPISLYSDCSKSPKSPDFPEEKPLISARQT- 154

  Fly   126 VNGCSNEEAVYPLLVDSDKFDPFFEPAKVRSPNKEFNSTISNLSDIKNELPETSQDLGFNSYNTS 190
             .|...:..:.|::.     .|..:|..:         .|...:||:.......:.:.|....| 
 Frog   155 -TGSITQRKLPPVVP-----KPSIQPKAI---------IIPATADIQASATVAPKTIIFQPLTT- 203

  Fly   191 RNNSTLTKSWPINTELNLDNQ------VPKTV--LPLS-------------RTIYLPSHDYKGLL 234
                .|.|..|:.|.....:.      .|.||  ||.|             .|..:|:.....|.
 Frog   204 ----LLPKQQPLITLQQAPSAGQPVLLAPSTVVQLPASGIVTTQQVLTVGGGTATIPTSSMNILT 264

  Fly   235 PTV-KCNGDRTLKKNVNVRSKISNIVIKKKNATFIQSLKESTPSHTMDDKIYKKYQRMIKNRESA 298
            ||| :|             :|:|  .:|....|.:||:...|     |..:.::.||||||||||
 Frog   265 PTVPQC-------------AKMS--PVKPVMPTSVQSVDSGT-----DINVLRRQQRMIKNRESA 309

  Fly   299 SLSRKKRKEYVVSLETRINKLEKECDSLKAENITLRDQIFLLATSCQRESGNANGLLHNYSGSER 363
            ..||:|:|||:.:||.|:.....|.:.||.||.:|:..:..:.|                     
 Frog   310 FQSRRKKKEYMQTLEARLRVALSENERLKKENGSLQKLLEEVVT--------------------- 353

  Fly   364 SENKNGRFTSKAKHCNKNNTTATIKKNVAILFAMAFVVSLNAGNFQKYLNIPNNLEGKSEIE--P 426
             ||:            |...||..::.|.::...||::.    ||.. |:|..:..|..::|  |
 Frog   354 -ENQ------------KLKVTAPKRRAVCLMMVAAFLLL----NFSP-LSILESKPGSYDVEVSP 400

  Fly   427 VGKQLSMSNRRLLWADSEEEYKEKNNLSTFLSGKQKEPSLYFLNSGIRNHKINSFENITKNVSHT 491
            :     ..||.||...:.:|..|          .||.|      ...||.:..|.|.....|...
 Frog   401 I-----RHNRHLLGFSASDENVE----------AQKVP------DNTRNDRYISNEKALMVVKEP 444

  Fly   492 YSY-NEPPPLTYLSTRNCINRCRSHNGSSNQSKYFMLAQNLHKWISGTLNVSNFSKEKEDSNGFE 555
            ..| .:|||            |:.   ..|:::...|.|.|..||        ...|.|.:....
 Frog   445 LLYIPQPPP------------CQP---QVNKTQTLRLNQELRGWI--------HRHEVERTKSRR 486

  Fly   556 FFNNYFEEKRDIHIKHEKRKMFIDLNDYTSVLPEKQQKLNNTKSFE----NMREQINVISKIERR 616
            ..|::.|:|.:     ||..     |.....:......:.|:...:    :.|...:.:..|.||
 Frog   487 MTNSHKEQKPE-----EKSG-----NSELVTMQYTDTSIRNSNELQVYYYSPRSYQDFLEAIRRR 541

  Fly   617 DDTFYVFSFNMDHALLPALSYNSSYRPKLSLVLPLENPG---INGK--MKMIQVDCEVFNTKDFE 676
            :|||||.||..||.||||...|.:.|||:|::||..|..   |||:  ..|:|:||||.:|:...
 Frog   542 EDTFYVVSFRRDHLLLPATHRNKTTRPKMSIILPSTNVNDNVINGQDFEVMMQIDCEVMDTRILH 606

  Fly   677 VSHHLFPAKLRQNVIPRKPNKLNIKKSSTETPVS 710
            |.....|..||::    :.|:.|   |...:|.|
 Frog   607 VKASTIPPFLREH----RENQTN---SFYNSPTS 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atf6NP_995745.1 bZIP_ATF6 287..338 CDD:269848 25/50 (50%)
coiled coil 287..338 CDD:269848 25/50 (50%)
atf6XP_002933826.2 SP1-4_N <147..>300 CDD:425404 36/193 (19%)
bZIP_ATF6 298..349 CDD:269848 25/50 (50%)
coiled coil 298..349 CDD:269848 25/50 (50%)

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