DRSC/TRiP Functional Genomics Resources

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Protein Alignment gus and spsb4a

DIOPT Version :9

Sequence 1:NP_001246140.1 Gene:gus / 35478 FlyBaseID:FBgn0026238 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001243571.1 Gene:spsb4a / 557906 ZFINID:ZDB-GENE-070911-3 Length:277 Species:Danio rerio


Alignment Length:280 Identity:196/280 - (70%)
Similarity:232/280 - (82%) Gaps:7/280 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQKISGGVKTVSRNDSQSTFKPIIPRELQA-DFVKPARIDILLDMPPASRDLQLKHSWNSEDRS 64
            |||||||.:|:|... .:.:|:| :.|||:. ||.||||:|:||||||||.:.||:|:|||:|||
Zfish     1 MGQKISGSIKSVDVR-GEPSFRP-LRRELRGPDFFKPARLDLLLDMPPASYEQQLRHAWNSDDRS 63

  Fly    65 LNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSV 129
            ||||:|:||||||||||||||||.|||:||.|:|||:|.|:||.|||||||||||.|.|||||||
Zfish    64 LNIFIKDDDKLTFHRHPVAQSTDGIRGRVGYTRGLHVWRIHWPARQRGTHAVVGVATGDAPLHSV 128

  Fly   130 GYQSLVGSTEQSWGWDLGRNKLYHDSKN---CAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLS 191
            ||.|||||..:|||||||||||||:|||   .:..|||:.|:.:|||::||..:|.|||||||||
Zfish   129 GYTSLVGSDSESWGWDLGRNKLYHNSKNRPASSAPTYPSFLEPEEAFVLPDTLMVVLDMDEGTLS 193

  Fly   192 FIVDQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIGGLDPEPLPLMDLCRRTIRQKIGRTNL 256
            |:||.||||:|||||:||||||||||||||||||||||.|||||||||||||||..|..:||..|
Zfish   194 FMVDGQYLGVAFRGLKGKKLYPIVSAVWGHCEITMRYINGLDPEPLPLMDLCRRAARLALGRERL 258

  Fly   257 EEHIQQLQLPLSMKTYLLYK 276
            :| |:.|.||.|:|.||.|:
Zfish   259 QE-IETLPLPQSLKNYLQYQ 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gusNP_001246140.1 SPRY_SOCS1-2-4 56..229 CDD:293963 134/175 (77%)
SOCS_SSB1_4 234..276 CDD:239688 25/41 (61%)
spsb4aNP_001243571.1 SPRY_SOCS1-2-4 55..231 CDD:293963 134/175 (77%)
SOCS_SSB1_4 236..277 CDD:239688 25/41 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595037
Domainoid 1 1.000 210 1.000 Domainoid score I2765
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H25315
Inparanoid 1 1.050 406 1.000 Inparanoid score I1862
OMA 1 1.010 - - QHG48774
OrthoDB 1 1.010 - - D399707at33208
OrthoFinder 1 1.000 - - FOG0002660
OrthoInspector 1 1.000 - - otm25627
orthoMCL 1 0.900 - - OOG6_106110
Panther 1 1.100 - - LDO PTHR12245
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4840
SonicParanoid 1 1.000 - - X1769
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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