DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gus and spsb4a

DIOPT Version :10

Sequence 1:NP_610158.3 Gene:gus / 35478 FlyBaseID:FBgn0026238 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001243571.1 Gene:spsb4a / 557906 ZFINID:ZDB-GENE-070911-3 Length:277 Species:Danio rerio


Alignment Length:280 Identity:196/280 - (70%)
Similarity:232/280 - (82%) Gaps:7/280 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQKISGGVKTVSRNDSQSTFKPIIPRELQA-DFVKPARIDILLDMPPASRDLQLKHSWNSEDRS 64
            |||||||.:|:|... .:.:|:| :.|||:. ||.||||:|:||||||||.:.||:|:|||:|||
Zfish     1 MGQKISGSIKSVDVR-GEPSFRP-LRRELRGPDFFKPARLDLLLDMPPASYEQQLRHAWNSDDRS 63

  Fly    65 LNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSV 129
            ||||:|:||||||||||||||||.|||:||.|:|||:|.|:||.|||||||||||.|.|||||||
Zfish    64 LNIFIKDDDKLTFHRHPVAQSTDGIRGRVGYTRGLHVWRIHWPARQRGTHAVVGVATGDAPLHSV 128

  Fly   130 GYQSLVGSTEQSWGWDLGRNKLYHDSKN---CAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLS 191
            ||.|||||..:|||||||||||||:|||   .:..|||:.|:.:|||::||..:|.|||||||||
Zfish   129 GYTSLVGSDSESWGWDLGRNKLYHNSKNRPASSAPTYPSFLEPEEAFVLPDTLMVVLDMDEGTLS 193

  Fly   192 FIVDQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIGGLDPEPLPLMDLCRRTIRQKIGRTNL 256
            |:||.||||:|||||:||||||||||||||||||||||.|||||||||||||||..|..:||..|
Zfish   194 FMVDGQYLGVAFRGLKGKKLYPIVSAVWGHCEITMRYINGLDPEPLPLMDLCRRAARLALGRERL 258

  Fly   257 EEHIQQLQLPLSMKTYLLYK 276
            :| |:.|.||.|:|.||.|:
Zfish   259 QE-IETLPLPQSLKNYLQYQ 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gusNP_610158.3 SPRY_SOCS1-2-4 56..229 CDD:293963 134/175 (77%)
SOCS_SSB1_4 234..276 CDD:239688 25/41 (61%)
spsb4aNP_001243571.1 SPRY_SOCS1-2-4 55..231 CDD:293963 134/175 (77%)
SOCS_SSB1_4 236..277 CDD:239688 25/41 (61%)

Return to query results.
Submit another query.