DRSC/TRiP Functional Genomics Resources

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Protein Alignment gus and Spsb4

DIOPT Version :9

Sequence 1:NP_001246140.1 Gene:gus / 35478 FlyBaseID:FBgn0026238 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001100319.1 Gene:Spsb4 / 300950 RGDID:1562307 Length:273 Species:Rattus norvegicus


Alignment Length:277 Identity:188/277 - (67%)
Similarity:220/277 - (79%) Gaps:5/277 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQKISGGVKTVSRNDSQSTFKPIIPRELQA-DFVKPARIDILLDMPPASRDLQLKHSWNSEDRS 64
            ||||:||.:|:|...  :...:| ..|||:. :..:|||:|.|||||.|...:||:|:||.||||
  Rat     1 MGQKLSGSLKSVEVR--EPALRP-AKRELRGLEPGRPARLDQLLDMPAAGLAVQLRHAWNPEDRS 62

  Fly    65 LNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSV 129
            ||:|||:||:|||||||||||||.||||||..:|||.|:|:||.|||||||||||.||.||||||
  Rat    63 LNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQIHWPARQRGTHAVVGVATARAPLHSV 127

  Fly   130 GYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLSFIV 194
            ||.:||||..:||||||||::||||.||..||.|||.|..||||.:||..||.||||||||||||
  Rat   128 GYTALVGSDSESWGWDLGRSRLYHDGKNRPGVAYPAFLGPDEAFALPDSLLVVLDMDEGTLSFIV 192

  Fly   195 DQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIGGLDPEPLPLMDLCRRTIRQKIGRTNLEEH 259
            |.||||:|||||:||||||:|||||||||:|||||.|||||||||||||||:||..:||..|.: 
  Rat   193 DGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDPEPLPLMDLCRRSIRSALGRQRLRD- 256

  Fly   260 IQQLQLPLSMKTYLLYK 276
            |..|.||.|:|.||.|:
  Rat   257 IGSLPLPQSLKNYLQYQ 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gusNP_001246140.1 SPRY_SOCS1-2-4 56..229 CDD:293963 133/172 (77%)
SOCS_SSB1_4 234..276 CDD:239688 25/41 (61%)
Spsb4NP_001100319.1 SPRY_SOCS1-2-4 54..227 CDD:293963 133/172 (77%)
SOCS 232..273 CDD:413360 25/41 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353058
Domainoid 1 1.000 211 1.000 Domainoid score I2703
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H25315
Inparanoid 1 1.050 407 1.000 Inparanoid score I1829
OMA 1 1.010 - - QHG48774
OrthoDB 1 1.010 - - D399707at33208
OrthoFinder 1 1.000 - - FOG0002660
OrthoInspector 1 1.000 - - otm44465
orthoMCL 1 0.900 - - OOG6_106110
Panther 1 1.100 - - LDO PTHR12245
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1769
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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