DRSC/TRiP Functional Genomics Resources

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Protein Alignment gus and Spsb2

DIOPT Version :9

Sequence 1:NP_001246140.1 Gene:gus / 35478 FlyBaseID:FBgn0026238 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001009660.1 Gene:Spsb2 / 297592 RGDID:1310854 Length:264 Species:Rattus norvegicus


Alignment Length:279 Identity:137/279 - (49%)
Similarity:166/279 - (59%) Gaps:18/279 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQKISGGVKTVSRNDSQSTFKPIIP--RELQADFVKPARIDILLDMPPASRDLQLKHSWNSEDR 63
            |||       |.....|.||     |  ..|.:|...|..::.||..||.....|..|.||.:|.
  Rat     1 MGQ-------TALARGSSST-----PSSHALYSDLSPPEGLEELLSAPPPDLGAQRHHGWNPKDC 53

  Fly    64 SLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHS 128
            |.||.|||.. |.|.|.|||||||.:|||.|.::|||.|||.||..||||||||||.||.|||.:
  Rat    54 SENIDVKEGG-LCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQA 117

  Fly   129 VGYQSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLSFI 193
            ..|.:|:||..:|||||:||.||||.||......||| ....|..:||::.||.|||:||||.:.
  Rat   118 DHYAALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPA-GPQGEQLVVPERLLVVLDMEEGTLGYS 181

  Fly   194 VDQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIG-GLDPEPLPLMDLCRRTIRQKIGRTNLE 257
            :...|||.|||||:|:.|||.||||||.|::.:||:| ....||..|:.|.|..:|..:|.|.|.
  Rat   182 IGGTYLGPAFRGLKGRTLYPSVSAVWGQCQVRIRYLGERRAEEPQSLLHLSRLCVRHALGDTRLG 246

  Fly   258 EHIQQLQLPLSMKTYLLYK 276
            : |..|.||.:||.|||||
  Rat   247 Q-ISSLPLPPAMKRYLLYK 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gusNP_001246140.1 SPRY_SOCS1-2-4 56..229 CDD:293963 99/172 (58%)
SOCS_SSB1_4 234..276 CDD:239688 18/41 (44%)
Spsb2NP_001009660.1 SPRY_SOCS1-2-4 46..217 CDD:293963 99/172 (58%)
SOCS_SSB2 223..264 CDD:239689 18/41 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D399707at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12245
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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