DRSC/TRiP Functional Genomics Resources

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Protein Alignment gus and si:ch1073-228j22.2

DIOPT Version :9

Sequence 1:NP_001246140.1 Gene:gus / 35478 FlyBaseID:FBgn0026238 Length:279 Species:Drosophila melanogaster
Sequence 2:XP_021325532.1 Gene:si:ch1073-228j22.2 / 100334514 ZFINID:ZDB-GENE-110411-227 Length:285 Species:Danio rerio


Alignment Length:268 Identity:98/268 - (36%)
Similarity:145/268 - (54%) Gaps:25/268 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SRNDSQSTFKPIIPRELQADFVKPARIDILLDMPPASRDLQLKHSWNSEDRSLNIFVKEDDKLTF 77
            :||.|.|.|.|.       ....|.|:.:|||.||.:.. ..:..|:....|.|: .:....:..
Zfish    16 NRNQSSSAFTPF-------SVTPPIRLAVLLDTPPVAPG-NPRSQWSPTHLSPNL-QRCVSGVRV 71

  Fly    78 HRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQSLVGSTEQSW 142
            ||..|.||:|..|..:|.:.||||||:.|..:|||:||::||.|..:||.:.||::|:|....||
Zfish    72 HRGHVEQSSDAARAAIGTSTGLHIWEVKWEGQQRGSHALLGVSTHKSPLQASGYKALIGGDSCSW 136

  Fly   143 GWDLGRNKLYHDSKNCAGVTYP-----AILKNDEAFLVPDKFLVALDMDEGTLSFIVDQQYLGIA 202
            ||:|..|:|:||.|.  |.:||     .:|.      |||:.|:.:|.|.|||.::||..|||:|
Zfish   137 GWELSTNQLWHDGKE--GRSYPGGGATGVLS------VPDRVLLVVDADAGTLGYVVDDCYLGVA 193

  Fly   203 FRGL-RGKKLYPIVSAVWGHCEITMRYIGGLDPEPLPLMDLCRRTIRQKIGRTNLEEHIQQLQLP 266
            |:.| :|.:|:|.||.|||..||.:||:.|...:...|..|.|.:.|:.:.....:.|..  .||
Zfish   194 FQDLPKGVELFPAVSCVWGGAEICIRYLSGTTRDAPALQALSRLSARRALRLHGTQNHTH--SLP 256

  Fly   267 LSMKTYLL 274
            .:::..||
Zfish   257 SALQRLLL 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gusNP_001246140.1 SPRY_SOCS1-2-4 56..229 CDD:293963 74/178 (42%)
SOCS_SSB1_4 234..276 CDD:239688 9/41 (22%)
si:ch1073-228j22.2XP_021325532.1 SPRY 53..221 CDD:322017 74/176 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12245
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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