DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3107 and SDD3

DIOPT Version :10

Sequence 1:NP_610156.1 Gene:CG3107 / 35475 FlyBaseID:FBgn0033005 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_014543.1 Gene:SDD3 / 854055 SGDID:S000005458 Length:1037 Species:Saccharomyces cerevisiae


Alignment Length:1078 Identity:228/1078 - (21%)
Similarity:426/1078 - (39%) Gaps:234/1078 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 EHISEFELTSYTFRYERTGTELWHIDRNDS---NNVFSINFRTTPFDSTGLPHILEHLSLCGSQK 140
            :::.::.:|.|.  .|||..:|.||:...|   :..|::  .|...:.:|.||.||||...||:.
Yeast    12 DYVPQYHITKYI--SERTKLQLVHINHKTSPLVHGYFAV--PTECLNDSGAPHTLEHLIFMGSKS 72

  Fly   141 YPVRDPFFKMLNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQHIYLDAVFRPNLAYFDFLQEG 205
            ||.:.......|.|::. .||.|..|.|:|..|:.....|..|...|||.:..|.|.....|.|.
Yeast    73 YPYKGLLDTAGNLSLSN-TNAWTDTDQTVYTLSSAGWKGFSKLLPAYLDHILHPTLTDEACLTEV 136

  Fly   206 WRLENKDIFDKQSKLVIKGVVYNEMKGAFSENAQVFSQNLLNNIFPDHT-YRHVSGGNPLEIPKL 269
            :.::.:::.|       ||||::||:...::...:........:||:.: ||..:||....:..|
Yeast   137 YHIDPENLGD-------KGVVFSEMEAIETQGWYISGLEKQRLMFPEGSGYRSETGGLTKNLRTL 194

  Fly   270 AYNDLVEFHKKYYHPSNARIYSYGLFDASKTLALLDEEYLSDQSWVDNSY----SLIRQQERWTQ 330
            ..:::.:|||..|...|..:...|.....:.|.:::|       | ||..    |.|.::..:..
Yeast   195 TNDEIRQFHKSLYSSDNLCVIVCGNVPTDELLTVMEE-------W-DNKLPEIPSNIPKKRPFLD 251

  Fly   331 PRLVHISSRLDNM-GTTI------DRQNQIAIALLMCDATNIQESFELHVLSEVLIRGPNSPFYK 388
            .:|.||....|.: .:|:      :.|.::..:.:....::.:....:.||.:.......:.|.:
Yeast   252 NKLSHIPQSRDKVTESTVEFPELDESQGELLFSWIGVPYSDFRNDLAVDVLLDYFTDSALAVFTR 316

  Fly   389 NLIEPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDF---------KKCIEIFDKTIINSMNDG 444
            .|:|      .:.....|:|.....|:..:.|||::..         .|.:||.....|      
Yeast   317 ELVE------IDDPMANSTDCCTDYFMRTIIDLRIQGVPTEKIAATKTKVLEILKTHTI------ 369

  Fly   445 FDSQHVESVLHNLE----LSLKHQNPNFGNTLLFNSTALWNHDG-DVVSNLR-VSDMISGLRESI 503
             |...|..|:.|.:    |:.:....:..::.:.......|.|| .:||:|: :||..:.|:.| 
Yeast   370 -DLSRVRQVVENTKWEYLLNYEKNGESRFSSAVITDYIYGNEDGSSLVSSLKDLSDFDALLQWS- 432

  Fly   504 SQNKKYFQEKIEKYFANNNHRLTLTMSPDE-AYE-------DKFKQAELELVEQK----VKLLDE 556
               :|.:|..:.:.|.:|. .:.:|..|.. .||       |..||.|.|..::|    :|.|:.
Yeast   433 ---QKDWQSLLNRIFVDNK-PIIVTAKPSALMYEQLEKEKSDLIKQREAEFDDEKKLVLLKRLNN 493

  Fly   557 VKIEKIYERGLILDSYQKAE----------SNTDLLPCL---TMNDVRDP---------PKWPKL 599
            .|  .|.:|.:.....||.|          .||..:..:   ..|:|.||         |....|
Yeast   494 AK--NINDRPIPKSLLQKFEIDNPSKSVEFVNTKSIATVDSYKYNNVSDPLTKKILETRPDNFPL 556

  Fly   600 FIQNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPLFCNVISAMGTTNYNYREFDK--- 661
            || ::.:..:|          :.:..|.:...|.::|.|:|.|              ..||:   
Yeast   557 FI-HLNHFPSQ----------FIELHFLVNSASIKDTSLLPYF--------------NMFDELFS 596

  Fly   662 ---HILLKTGGFDFKLHLIEDVRDSKSYSLSVMINTHALNNNVPEMFAL---CQ--------ELI 712
               .||.:....:..|...|.|...||.::...|| ..|..:.|::...   |:        :.|
Yeast   597 MPMKILDEESNVETMLSFEEVVAKLKSETIDAQIN-QGLKGSCPDLINFKIQCRAGGYSNSVQWI 660

  Fly   713 KNVRFD---DSERLKMLIENYISYI-------SVGVAS--SGHLY---AMLGATSQVCDAGKLKS 762
            |:..||   |..|:::|:|||::.|       :|.::|  :.:||   ::..:|..:....||:.
Yeast   661 KHCLFDMVFDENRVRILLENYLNSIVEWKRNGNVMLSSLTNRNLYSARSLKKSTDPLFVEAKLQE 725

  Fly   763 LLYGVDHIDFMKNFVHSTSTVDICDKLSTIASKV---FNK-------------------DNMRGA 805
            :...:::.:|.|         :|..::.|:..::   |||                   :.:...
Yeast   726 IFAEIENGNFEK---------EILPRIETMRKQLRANFNKFHILVLGDISKIDDVYEPWNPLIKC 781

  Fly   806 INTTQSYEPSAISNYEKFLESLPTFGKTQTSRNIHYLDPSCQQYVMNIPVNYCAKALFTVPY-LH 869
            :|.....|...|....:.|:::.:..:|...:......|:.:...||:        :.::|: |.
Yeast   782 LNIAHPVEKLKIPPVPRALDTISSICRTPGEKAFIITTPASESAYMNL--------ITSIPFNLD 838

  Fly   870 QDHPTLRVLAKLLSAKYLLPV-------IREKNGAYGAG-AKISSDGIFSFYSYRDPNSTKTLNA 926
            ...|...:::  |:::||..|       ||....||||. .|:.....:.|..||..:..|....
Yeast   839 YHDPEYAIVS--LASEYLECVEGPFWKGIRGAGLAYGASMLKLCEINSWGFNIYRGADIIKCYEV 901

  Fly   927 FDETYKWLRANQNVIDQQSLFESKLGVLQQLDTPIAPGNIGIDYFLYEVSQ--EDF--------- 980
            ..:..:...:.....|:|.:..:...::.:|.|      |...||...:|:  ::|         
Yeast   902 GKQIVQDYASGALEFDEQLIQGAISSIINRLAT------IECGYFETALSKYVDEFCLQRGNNFN 960

  Fly   981 ESYRSRMLSVTIDDLQCAIENYF-----GKESMHYGKC 1013
            |.|..|:.:||..||:.|::.||     ..:|:.:..|
Yeast   961 ELYLERLQNVTKTDLKNAMQKYFVNMFDSNKSVAFVSC 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3107NP_610156.1 Cym1 63..996 CDD:440649 222/1054 (21%)
SDD3NP_014543.1 PqqL 29..458 CDD:440377 104/464 (22%)
PqqL <743..996 CDD:440377 50/268 (19%)

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