DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3107 and SDD3

DIOPT Version :9

Sequence 1:NP_001036470.1 Gene:CG3107 / 35475 FlyBaseID:FBgn0033005 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_014543.1 Gene:SDD3 / 854055 SGDID:S000005458 Length:1037 Species:Saccharomyces cerevisiae


Alignment Length:1078 Identity:228/1078 - (21%)
Similarity:426/1078 - (39%) Gaps:234/1078 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 EHISEFELTSYTFRYERTGTELWHIDRNDS---NNVFSINFRTTPFDSTGLPHILEHLSLCGSQK 140
            :::.::.:|.|.  .|||..:|.||:...|   :..|::  .|...:.:|.||.||||...||:.
Yeast    12 DYVPQYHITKYI--SERTKLQLVHINHKTSPLVHGYFAV--PTECLNDSGAPHTLEHLIFMGSKS 72

  Fly   141 YPVRDPFFKMLNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQHIYLDAVFRPNLAYFDFLQEG 205
            ||.:.......|.|::. .||.|..|.|:|..|:.....|..|...|||.:..|.|.....|.|.
Yeast    73 YPYKGLLDTAGNLSLSN-TNAWTDTDQTVYTLSSAGWKGFSKLLPAYLDHILHPTLTDEACLTEV 136

  Fly   206 WRLENKDIFDKQSKLVIKGVVYNEMKGAFSENAQVFSQNLLNNIFPDHT-YRHVSGGNPLEIPKL 269
            :.::.:::.|       ||||::||:...::...:........:||:.: ||..:||....:..|
Yeast   137 YHIDPENLGD-------KGVVFSEMEAIETQGWYISGLEKQRLMFPEGSGYRSETGGLTKNLRTL 194

  Fly   270 AYNDLVEFHKKYYHPSNARIYSYGLFDASKTLALLDEEYLSDQSWVDNSY----SLIRQQERWTQ 330
            ..:::.:|||..|...|..:...|.....:.|.:::|       | ||..    |.|.::..:..
Yeast   195 TNDEIRQFHKSLYSSDNLCVIVCGNVPTDELLTVMEE-------W-DNKLPEIPSNIPKKRPFLD 251

  Fly   331 PRLVHISSRLDNM-GTTI------DRQNQIAIALLMCDATNIQESFELHVLSEVLIRGPNSPFYK 388
            .:|.||....|.: .:|:      :.|.::..:.:....::.:....:.||.:.......:.|.:
Yeast   252 NKLSHIPQSRDKVTESTVEFPELDESQGELLFSWIGVPYSDFRNDLAVDVLLDYFTDSALAVFTR 316

  Fly   389 NLIEPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDF---------KKCIEIFDKTIINSMNDG 444
            .|:|      .:.....|:|.....|:..:.|||::..         .|.:||.....|      
Yeast   317 ELVE------IDDPMANSTDCCTDYFMRTIIDLRIQGVPTEKIAATKTKVLEILKTHTI------ 369

  Fly   445 FDSQHVESVLHNLE----LSLKHQNPNFGNTLLFNSTALWNHDG-DVVSNLR-VSDMISGLRESI 503
             |...|..|:.|.:    |:.:....:..::.:.......|.|| .:||:|: :||..:.|:.| 
Yeast   370 -DLSRVRQVVENTKWEYLLNYEKNGESRFSSAVITDYIYGNEDGSSLVSSLKDLSDFDALLQWS- 432

  Fly   504 SQNKKYFQEKIEKYFANNNHRLTLTMSPDE-AYE-------DKFKQAELELVEQK----VKLLDE 556
               :|.:|..:.:.|.:|. .:.:|..|.. .||       |..||.|.|..::|    :|.|:.
Yeast   433 ---QKDWQSLLNRIFVDNK-PIIVTAKPSALMYEQLEKEKSDLIKQREAEFDDEKKLVLLKRLNN 493

  Fly   557 VKIEKIYERGLILDSYQKAE----------SNTDLLPCL---TMNDVRDP---------PKWPKL 599
            .|  .|.:|.:.....||.|          .||..:..:   ..|:|.||         |....|
Yeast   494 AK--NINDRPIPKSLLQKFEIDNPSKSVEFVNTKSIATVDSYKYNNVSDPLTKKILETRPDNFPL 556

  Fly   600 FIQNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPLFCNVISAMGTTNYNYREFDK--- 661
            || ::.:..:|          :.:..|.:...|.::|.|:|.|              ..||:   
Yeast   557 FI-HLNHFPSQ----------FIELHFLVNSASIKDTSLLPYF--------------NMFDELFS 596

  Fly   662 ---HILLKTGGFDFKLHLIEDVRDSKSYSLSVMINTHALNNNVPEMFAL---CQ--------ELI 712
               .||.:....:..|...|.|...||.::...|| ..|..:.|::...   |:        :.|
Yeast   597 MPMKILDEESNVETMLSFEEVVAKLKSETIDAQIN-QGLKGSCPDLINFKIQCRAGGYSNSVQWI 660

  Fly   713 KNVRFD---DSERLKMLIENYISYI-------SVGVAS--SGHLY---AMLGATSQVCDAGKLKS 762
            |:..||   |..|:::|:|||::.|       :|.::|  :.:||   ::..:|..:....||:.
Yeast   661 KHCLFDMVFDENRVRILLENYLNSIVEWKRNGNVMLSSLTNRNLYSARSLKKSTDPLFVEAKLQE 725

  Fly   763 LLYGVDHIDFMKNFVHSTSTVDICDKLSTIASKV---FNK-------------------DNMRGA 805
            :...:::.:|.|         :|..::.|:..::   |||                   :.:...
Yeast   726 IFAEIENGNFEK---------EILPRIETMRKQLRANFNKFHILVLGDISKIDDVYEPWNPLIKC 781

  Fly   806 INTTQSYEPSAISNYEKFLESLPTFGKTQTSRNIHYLDPSCQQYVMNIPVNYCAKALFTVPY-LH 869
            :|.....|...|....:.|:::.:..:|...:......|:.:...||:        :.::|: |.
Yeast   782 LNIAHPVEKLKIPPVPRALDTISSICRTPGEKAFIITTPASESAYMNL--------ITSIPFNLD 838

  Fly   870 QDHPTLRVLAKLLSAKYLLPV-------IREKNGAYGAG-AKISSDGIFSFYSYRDPNSTKTLNA 926
            ...|...:::  |:::||..|       ||....||||. .|:.....:.|..||..:..|....
Yeast   839 YHDPEYAIVS--LASEYLECVEGPFWKGIRGAGLAYGASMLKLCEINSWGFNIYRGADIIKCYEV 901

  Fly   927 FDETYKWLRANQNVIDQQSLFESKLGVLQQLDTPIAPGNIGIDYFLYEVSQ--EDF--------- 980
            ..:..:...:.....|:|.:..:...::.:|.|      |...||...:|:  ::|         
Yeast   902 GKQIVQDYASGALEFDEQLIQGAISSIINRLAT------IECGYFETALSKYVDEFCLQRGNNFN 960

  Fly   981 ESYRSRMLSVTIDDLQCAIENYF-----GKESMHYGKC 1013
            |.|..|:.:||..||:.|::.||     ..:|:.:..|
Yeast   961 ELYLERLQNVTKTDLKNAMQKYFVNMFDSNKSVAFVSC 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3107NP_001036470.1 Cym1 68..1003 CDD:223957 224/1061 (21%)
Peptidase_M16 120..>177 CDD:279066 20/56 (36%)
Peptidase_M16_C 268..457 CDD:282978 38/208 (18%)
M16C_assoc 531..773 CDD:285556 66/307 (21%)
SDD3NP_014543.1 Cym1 1..1017 CDD:223957 228/1078 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1026
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1786
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R283
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.790

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