DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3107 and PREP1

DIOPT Version :10

Sequence 1:NP_610156.1 Gene:CG3107 / 35475 FlyBaseID:FBgn0033005 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_188548.2 Gene:PREP1 / 821451 AraportID:AT3G19170 Length:1080 Species:Arabidopsis thaliana


Alignment Length:971 Identity:292/971 - (30%)
Similarity:484/971 - (49%) Gaps:83/971 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GFQCERVEHISEFELTSYTFRYERTGTELWHIDRNDSNNVFSINFRTTPFDSTGLPHILEHLSLC 136
            ||:....|.|||.:..:..|::::||.|:..:...|.|.||.:.|||.|.||||:||||||..||
plant   106 GFEKVSEEFISECKSKAILFKHKKTGCEVMSVSNEDENKVFGVVFRTPPKDSTGIPHILEHSVLC 170

  Fly   137 GSQKYPVRDPFFKMLNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQHIYLDAVFRPNLA--YF 199
            ||:||||::||.::|..|:.||:||.|.||.|.||.::.|..||.||..:||||||.|...  ..
plant   171 GSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYLDAVFFPKCVDDAH 235

  Fly   200 DFLQEGWRLENKDIFDKQSKLVIKGVVYNEMKGAFSENAQVFSQNLLNNIFPDHTYRHVSGGNPL 264
            .|.||||..|   :.|....:..||||:|||||.:|:...:..:.....:.|::||...|||:|.
plant   236 TFQQEGWHYE---LNDPSEDISYKGVVFNEMKGVYSQPDNILGRIAQQALSPENTYGVDSGGDPK 297

  Fly   265 EIPKLAYNDLVEFHKKYYHPSNARIYSYGLFDASKTLALLDEEYLS--DQSWVDNSYSLIRQQER 327
            :||.|.:.:..|||::|||||||||:.||..|....|.:| .|||.  :.|...|| |.|:.|:.
plant   298 DIPNLTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLRVL-SEYLDMFEASPSPNS-SKIKFQKL 360

  Fly   328 WTQP-RLV--HISSRLDNMGTTIDRQNQIAIALLMCD-ATNIQESFELHVLSEVLIRGPNSPFYK 388
            :::| |||  :.:.|    ...:.:::.:.:..|:.: ..::|....|..|..:::..|.||..|
plant   361 FSEPVRLVEKYPAGR----DGDLKKKHMLCVNWLLSEKPLDLQTQLALGFLDHLMLGTPASPLRK 421

  Fly   389 NLIEPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDFKKCIEIFDKTIINSMNDGFDSQHVESV 453
            .|:|... |....::|.|.:.....|.:||:.:..|:.:|..|:...|:.....:|||:..||:.
plant   422 ILLESGL-GEALVSSGLSDELLQPQFGIGLKGVSEENVQKVEELIMDTLKKLAEEGFDNDAVEAS 485

  Fly   454 LHNLELSLKHQNPNF---GNTLLFNSTALWNHDGDVVSNLRVSDMISGLRESISQ--NKKYFQEK 513
            ::.:|.||:..|...   |.:|:..|.:.|.:|.|....|:.::.:..|:..|::  :|..|...
plant   486 MNTIEFSLRENNTGSFPRGLSLMLQSISKWIYDMDPFEPLKYTEPLKALKTRIAEEGSKAVFSPL 550

  Fly   514 IEKYFANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKI----EKIYERGLILDSYQK 574
            |||...||:||:|:.|.||.      ::|..|.||:| .:|::||.    |.:.|.....:..:.
plant   551 IEKLILNNSHRVTIEMQPDP------EKATQEEVEEK-NILEKVKAAMTEEDLAELARATEELKL 608

  Fly   575 AESNTD------LLPCLTMNDVRDPPKWPKLFIQNVQNVRTQICKVPTNEITYFKCMFNITGLSH 633
            .:...|      .:|.|.:.|:...|.:....:.::..|:.....:.||:|.|.:.:|:|..|.|
plant   609 KQETPDPPEALRCVPSLNLGDIPKEPTYVPTEVGDINGVKVLRHDLFTNDIIYTEVVFDIGSLKH 673

  Fly   634 EETQLMPLFCNVISAMGTTNYNYREFDKHILLKTGGFDFKLHLIEDVRDSKSYSLSVMINTHALN 698
            |...|:||||..:..|||.:..:.:.::.|..||||... ..|...||........:::...::.
plant   674 ELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRKTGGISV-YPLTSSVRGKDEPCSKIIVRGKSMA 737

  Fly   699 NNVPEMFALCQELIKNVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSL 763
            ....::|.|...|::.|:|.|.:|.|..:....:.:...:..|||..|.....:.:..||.:...
plant   738 GRADDLFNLMNCLLQEVQFTDQQRFKQFVSQSRARMENRLRGSGHGIAAARMDAMLNIAGWMSEQ 802

  Fly   764 LYGVDHIDFMKNFVHSTSTVD-----ICDKLSTIASKVFNKDNMRGAINTTQSYEPSAISNYE-- 821
            :.|:.:::|:...   ...||     |...|..|...:..::..  .:|.|.  :..:::|.|  
plant   803 MGGLSYLEFLHTL---EKKVDEDWEGISSSLEEIRRSLLARNGC--IVNMTA--DGKSLTNVEKS 860

  Fly   822 --KFLESLP--------TFGKTQTSRNIHYLDPSCQQYVMNIPVNYCAKA--LFTVPYLHQDHPT 874
              |||:.||        |:......||        :..|:...|||..||  :::..|  :...:
plant   861 VAKFLDLLPENPSGGLVTWDGRLPLRN--------EAIVIPTQVNYVGKAGNIYSTGY--ELDGS 915

  Fly   875 LRVLAKLLSAKYLLPVIREKNGAYGAGAKISS-DGIFSFYSYRDPNSTKTLNAFDETYKWLRANQ 938
            ..|::|.:|..:|...:|...||||......| .|:||:.||||||..|||:.:|.|..:||...
plant   916 AYVISKHISNTWLWDRVRVSGGAYGGFCDFDSHSGVFSYLSYRDPNLLKTLDIYDGTGDFLRGLD 980

  Fly   939 NVIDQQSLFESKLGVLQQLDT---PIAPGNIGIDYFLYEVSQEDFESYRSRMLSVTIDDLQ 996
              :||::|.::.:|.:..:|:   |.|.|...:...|..|:.|:.:..|..:|:.::.|.:
plant   981 --VDQETLTKAIIGTIGDVDSYQLPDAKGYSSLLRHLLGVTDEERQRKREEILTTSLKDFK 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3107NP_610156.1 Cym1 63..996 CDD:440649 292/969 (30%)
PREP1NP_188548.2 Cym1 106..1080 CDD:440649 292/971 (30%)

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