DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3107 and pitrm1

DIOPT Version :10

Sequence 1:NP_610156.1 Gene:CG3107 / 35475 FlyBaseID:FBgn0033005 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_001039262.1 Gene:pitrm1 / 734137 XenbaseID:XB-GENE-952658 Length:1027 Species:Xenopus tropicalis


Alignment Length:1005 Identity:416/1005 - (41%)
Similarity:591/1005 - (58%) Gaps:38/1005 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KRKYKYEEGKTYHGFQCERVEHISEFELTSYTFRYERTGTELWHIDRNDSNNVFSINFRTTPFDS 123
            :|..:|..|::.|||....|..:.|..||:....::.||.:..|:.|.||||:||:.|||||.||
 Frog    29 ERALRYAPGESIHGFTVNEVTPVPELFLTAVKLSHDNTGAKYLHVAREDSNNLFSVQFRTTPLDS 93

  Fly   124 TGLPHILEHLSLCGSQKYPVRDPFFKMLNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQHIYL 188
            ||:||||||..||||||||.|||||||||||::|||||.|..|||:|||||.|..||:||..:||
 Frog    94 TGVPHILEHTVLCGSQKYPCRDPFFKMLNRSLSTFMNAFTASDYTMYPFSTQNAKDFQNLLSVYL 158

  Fly   189 DAVFRPNLAYFDFLQEGWRLENKDIFDKQSKLVIKGVVYNEMKGAFSENAQVFSQNLLNNIFPDH 253
            ||||.|.|...||.|||||||:::..|..|.|:.||:|:|||||||::|.:||||:|.|.:.|||
 Frog   159 DAVFFPCLRELDFWQEGWRLEHENPEDPNSPLIFKGIVFNEMKGAFTDNEKVFSQHLQNKLLPDH 223

  Fly   254 TYRHVSGGNPLEIPKLAYNDLVEFHKKYYHPSNARIYSYGLFDASKTLALLDEEYLSDQSWVDNS 318
            ||..||||.||.||.|.:..|.:||..:|||||||.::||.......|..:.|:.||....:|..
 Frog   224 TYSVVSGGEPLNIPDLTWEQLKQFHATHYHPSNARFFTYGNLPLEIHLKQIHEDALSKFERIDPK 288

  Fly   319 YSLIRQQERWTQPRLVHISSRLDNMGTTIDRQNQIAIALLMCDATNIQESFELHVLSEVLIRGPN 383
            .| :..||||..||...||...|:..:..::|..:::..|:.:.|:..|:|.|.:||.:::.|||
 Frog   289 TS-VPPQERWQSPREYSISCGTDSFASDPEKQTTVSVNFLLSEITDTFEAFTLSLLSSLMVDGPN 352

  Fly   384 SPFYKNLIEPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDFKKCIEIFDKTIINSMNDGFDSQ 448
            |||||.|||.|....::..||:::.|::|.|.:|||.:..||.:|...|.:|||......|.:::
 Frog   353 SPFYKALIEANLGTDFSPDTGFNNYTRETYFSIGLQGINKEDSEKVKAIINKTINEVAEHGIEAE 417

  Fly   449 HVESVLHNLELSLKHQNPNFGNTLLFNSTALWNHDGDVVSNLRVSDMISGLRESISQNKKYFQEK 513
            .:|::||.||:.:|||:.:||.||.....:.|||:||.|..|::.|.||..||.:.:|.|:.|:|
 Frog   418 RIEALLHKLEIQMKHQSTSFGLTLASYVASCWNHEGDPVDLLKIGDKISRFRECLKENPKFLQDK 482

  Fly   514 IEKYFANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKIEKIYERGLILDSYQKAESN 578
            :::||..:.||:||:|||||.:.||..|.|.|.:.||||.|.|.:.::|||:||.|...|....:
 Frog   483 VKQYFQVSQHRMTLSMSPDEQHYDKEAQLEAEKLTQKVKALSEEERKQIYEKGLELIRLQSKPQD 547

  Fly   579 TDLLPCLTMNDVRDPPKWP--KLFIQNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPL 641
            ...||.|.::|:.  ||.|  .|.|....:|..|.|..|||.:.||:.:.::..|..|....:||
 Frog   548 ASCLPALKVSDIE--PKIPLTDLDITYAGDVPVQYCAQPTNGMVYFRAVSSLNTLPEELKPYVPL 610

  Fly   642 FCNVISAMGTTNYNYREFDKHILLKTGGFDFKLHLIEDVRDSKSYSLSVMINTHALNNNVPEMFA 706
            ||:||:.:|...|||||..:.:.|.|||.....|:|.|..:..:|...|:.::..|:.|:|:|..
 Frog   611 FCSVITKLGCGVYNYREQAQQMELTTGGMSVCPHIITDDSNLDTYEQGVVFSSLCLDRNLPDMMH 675

  Fly   707 LCQELIKNVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSLLYGVDHID 771
            |..|:..:..|||.|||::|:......:|.|:..|||:||.:.|...:..||:|:.|..|:|.:.
 Frog   676 LWSEIFNSPHFDDEERLRVLVRMSAQEMSNGIPDSGHVYASIRAGRTLTPAGELQELFSGMDQVK 740

  Fly   772 FMKNFVHSTSTVDICDKLSTIASKVFNKDNMRGAINTTQSYEPSAISNYEKFLESLPTFGKTQTS 836
            .:|..........|..|||.|...|...||||.::|.|....|.|....|.||..:....|.:.|
 Frog   741 MIKRIAEMPEMGPILRKLSRIRKYVLLSDNMRCSVNATPQQMPVASKEIEHFLAGISRSKKERKS 805

  Fly   837 RNIHYLDPS--------------------------CQ---QYVMNIPVNYCAKALFTVPYLHQDH 872
            ...|.::.|                          ||   .:.::.||||..:.:.||||.|.|:
 Frog   806 IRPHVVEKSSSPSSSGSEISRRATRKLVGDPTFKPCQMKTHFSLSFPVNYIGECVRTVPYTHPDY 870

  Fly   873 PTLRVLAKLLSAKYLLPVIREKNGAYGAGAKISSDGIFSFYSYRDPNSTKTLNAFDETYKWLRAN 937
            .:||:||::::||:|...||||.||||.|||:|.||||.|||||||||..||:.|.:...|.::.
 Frog   871 ASLRILARIMTAKFLHGEIREKGGAYGGGAKLSFDGIFGFYSYRDPNSLSTLSTFQKAADWAKSG 935

  Fly   938 QNVIDQQSLFESKLGVLQQLDTPIAPGNIGIDYFLYEVSQEDFESYRSRMLSVTIDDLQCAIENY 1002
            |  ..||.:.|:||.|...:|:||||.:.|:::||:.:|.|..:.:|.::.:||..||..|...|
 Frog   936 Q--FTQQDVDEAKLSVFSAVDSPIAPSDKGMNHFLHGISDEMKQKHREQLFAVTHSDLTNASNKY 998

  Fly  1003 FGKESMHYGKCILGPVNANLELETSHKWII 1032
            ........|..||||.|.|:..:.|  |||
 Frog   999 LTAGQCTRGTAILGPENRNIAKDPS--WII 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3107NP_610156.1 Cym1 63..996 CDD:440649 401/963 (42%)
pitrm1NP_001039262.1 Cym1 33..1015 CDD:440649 409/986 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 800..829 4/28 (14%)

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