Protein Alignment CG3107 and Nrd1

DIOPT Version :10

• Sequence 1: NP_610156.1
• Gene: CG3107 / 35475
• FlyBaseID: FBgn0033005
• Length: 1034
• Species: Drosophila melanogaster
• Sequence 2: NP_572757.2
• Gene: Nrd1 / 32143
• FlyBaseID: FBgn0030344
• Length: 1147
• Species: Drosophila melanogaster
• Alignment Length: 876
• Identity: 173/876 - (19%)
• Similarity: 287/876 - (32%)
• Gaps: 287/876 - (32%)

  Fly   120 PFDSTGLPHILEHLSLCGSQKYPVRDPFFKMLNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQ 184
            |....||.|.|||:...||:||| ::..|....:....|.||.|..:.|::.|....:
  Fly   150 PTKYQGLAHFLEHMIFMGSEKYP-KENIFDAHIKKCGGFANANTDCEDTLFYFEVAEK------- 206

  Fly   185 HIYLDAVFRPNLAYFDFL-------QEGWRLENKDIFDKQ----------------SKLVIKGVV 226
              :||:    :|.||..|       ||..:.|...: |.:                :.|..||..
  Fly   207 --HLDS----SLDYFTALMKAPLMKQEAMQRERSAV-DSEFQQILQDDETRRDQLLASLATKGFP 264

  Fly   227 YNEMKGAFS-ENAQVFSQN--------LLNNIFPDH----------------------TYRHVSG 260
            :    |.|: .|.:...:|        :|:.|..:|                      ..||.||
  Fly   265 H----GTFAWGNMKSLKENVDDAELHKILHEIRKEHYGANRMYVCLQARLPIDELESLVVRHFSG 325

  Fly   261 --GNPLEIPKLA---YNDL--VEFHKKYYHPSNARIYSYGLFDASKTLALLDEEYLSDQSWVDNS 318
              .|.::.|.|:   |.|.  .|||::.:.                 :..::.|...:.:||
  Fly   326 IPHNEVKAPDLSSFNYKDAFKAEFHEQVFF-----------------VKPVENETKLELTWV--- 370

  Fly   319 YSLIRQQERWTQPRLVHISSRLDNMGTTIDRQNQIAIALLMCDATNIQESFELHVLSEVLIRGPN 383
            ...:||..|....:.:......:..|:......:...||                   .||.|
  Fly   371 LPNVRQYYRSKPDQFLSYLLGYEGRGSLCAYLRRRLWAL-------------------QLIAG-- 414

  Fly   384 SPFYKNLIEPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDFKKCIEIFDKTI--------INS 440
                   |:.|   |::..:.||.    ....:.|.|   |.||...|:...|.        ..|
  Fly   415 -------IDEN---GFDMNSMYSL----FNICIYLTD---EGFKNLDEVLAATFAYVKLFANCGS 462

  Fly   441 MNDGFDSQHVESVLHNLELSLKH--QNPNFGNTLLFNSTALWNHDGDVVSNLRV---SDMISGLR 500
            |.|.::.|.     .|.|...:.  |.|.|.|.            .::|.||:.   .|:::|..
  Fly   463 MKDVYEEQQ-----RNEETGFRFHAQRPAFDNV------------QELVLNLKYFPPKDILTGKE 510

  Fly   501 ESISQNKKYFQEKIEKYFANNNHRLTLTMSPDEAYED--KFKQAELELVEQKVKLLDEVKIEKIY 563
            .....|:::.:|.|...   |..:..|.::....|:|  .:.:.|.....:...:....|..|::
  Fly   511 LYYEYNEEHLKELISHL---NEMKFNLMVTSRRKYDDISAYDKTEEWFGTEYATIPMPEKWRKLW 572

  Fly   564 ERGLILDSYQKAESNTDLLPCLTMN-------DVRDPPK----------W---------PK---- 598
            |..:.|......|||..:....|::       :|.|.||          |         |:
  Fly   573 EDSVPLPELFLPESNKYVTDDFTLHWHSMGRPEVPDSPKLLIKTDTCELWFRQDDKFDLPEAHMA 637

  Fly   599 -LFI-----QNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPLFCNVISAMGTTNYNYR 657
             .||     ||.:|  ..:|.:....:.:..|           .:|.|    .|||  ..:|:..
  Fly   638 FYFISPMQRQNAKN--DAMCSLYEEMVRFHVC-----------EELYP----AISA--GLSYSLS 683

  Fly   658 EFDKHILLKTGGFDFKLHLI-EDVRDSKSYSLSVMIN-THALNNNVPEMF------ALCQELIK- 713
            ..:|.:|||..|::.||||| |.:.:.       |:| ...|:.|:...|      |....|||
  Fly   684 TIEKGLLLKVCGYNEKLHLIVEAIAEG-------MLNVAETLDENMLSAFVKNQRKAFFNALIKP 741

  Fly   714 -----NVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSLLYGVDHIDFM 773
                 ::|....||::.|:.|....:|..:......:|     .|......::||:.|    ::.
  Fly   742 KALNRDIRLCVLERIRWLMINKYKCLSSVILEDMREFA-----HQFPKELYIQSLIQG----NYT 797

  Fly   774 KNFVHSTST------------------VDICDKL----STIASKVFNKDNMRGAINTTQSYEPSA 816
            :...|:...                  .||..||    |.|.....|..:....|.......|:.
  Fly   798 EESAHNVMNSLLSRLNCKQIRERGRFLEDITVKLPVGTSIIRCHALNVQDTNTVITNFYQIGPNT 862

  Fly   817 ISNYEKFLESL------PTFGKTQTSRNIHY 841
            : ..|..|:.|      |.|.:.:|...:.|
  Fly   863 V-RVESILDLLMMFVDEPLFDQLRTKEQLGY 892

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3107	NP_610156.1	Cym1	63..996	CDD:440649	173/876 (20%)
Nrd1	NP_572757.2	Ptr	55..1030	CDD:440648	173/876 (20%)