DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3107 and Nrd1

DIOPT Version :9

Sequence 1:NP_001036470.1 Gene:CG3107 / 35475 FlyBaseID:FBgn0033005 Length:1034 Species:Drosophila melanogaster
Sequence 2:NP_572757.2 Gene:Nrd1 / 32143 FlyBaseID:FBgn0030344 Length:1147 Species:Drosophila melanogaster


Alignment Length:876 Identity:173/876 - (19%)
Similarity:287/876 - (32%) Gaps:287/876 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 PFDSTGLPHILEHLSLCGSQKYPVRDPFFKMLNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQ 184
            |....||.|.|||:...||:||| ::..|....:....|.||.|..:.|::.|....:       
  Fly   150 PTKYQGLAHFLEHMIFMGSEKYP-KENIFDAHIKKCGGFANANTDCEDTLFYFEVAEK------- 206

  Fly   185 HIYLDAVFRPNLAYFDFL-------QEGWRLENKDIFDKQ----------------SKLVIKGVV 226
              :||:    :|.||..|       ||..:.|...: |.:                :.|..||..
  Fly   207 --HLDS----SLDYFTALMKAPLMKQEAMQRERSAV-DSEFQQILQDDETRRDQLLASLATKGFP 264

  Fly   227 YNEMKGAFS-ENAQVFSQN--------LLNNIFPDH----------------------TYRHVSG 260
            :    |.|: .|.:...:|        :|:.|..:|                      ..||.||
  Fly   265 H----GTFAWGNMKSLKENVDDAELHKILHEIRKEHYGANRMYVCLQARLPIDELESLVVRHFSG 325

  Fly   261 --GNPLEIPKLA---YNDL--VEFHKKYYHPSNARIYSYGLFDASKTLALLDEEYLSDQSWVDNS 318
              .|.::.|.|:   |.|.  .|||::.:.                 :..::.|...:.:||   
  Fly   326 IPHNEVKAPDLSSFNYKDAFKAEFHEQVFF-----------------VKPVENETKLELTWV--- 370

  Fly   319 YSLIRQQERWTQPRLVHISSRLDNMGTTIDRQNQIAIALLMCDATNIQESFELHVLSEVLIRGPN 383
            ...:||..|....:.:......:..|:......:...||                   .||.|  
  Fly   371 LPNVRQYYRSKPDQFLSYLLGYEGRGSLCAYLRRRLWAL-------------------QLIAG-- 414

  Fly   384 SPFYKNLIEPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDFKKCIEIFDKTI--------INS 440
                   |:.|   |::..:.||.    ....:.|.|   |.||...|:...|.        ..|
  Fly   415 -------IDEN---GFDMNSMYSL----FNICIYLTD---EGFKNLDEVLAATFAYVKLFANCGS 462

  Fly   441 MNDGFDSQHVESVLHNLELSLKH--QNPNFGNTLLFNSTALWNHDGDVVSNLRV---SDMISGLR 500
            |.|.::.|.     .|.|...:.  |.|.|.|.            .::|.||:.   .|:::|..
  Fly   463 MKDVYEEQQ-----RNEETGFRFHAQRPAFDNV------------QELVLNLKYFPPKDILTGKE 510

  Fly   501 ESISQNKKYFQEKIEKYFANNNHRLTLTMSPDEAYED--KFKQAELELVEQKVKLLDEVKIEKIY 563
            .....|:::.:|.|...   |..:..|.::....|:|  .:.:.|.....:...:....|..|::
  Fly   511 LYYEYNEEHLKELISHL---NEMKFNLMVTSRRKYDDISAYDKTEEWFGTEYATIPMPEKWRKLW 572

  Fly   564 ERGLILDSYQKAESNTDLLPCLTMN-------DVRDPPK----------W---------PK---- 598
            |..:.|......|||..:....|::       :|.|.||          |         |:    
  Fly   573 EDSVPLPELFLPESNKYVTDDFTLHWHSMGRPEVPDSPKLLIKTDTCELWFRQDDKFDLPEAHMA 637

  Fly   599 -LFI-----QNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPLFCNVISAMGTTNYNYR 657
             .||     ||.:|  ..:|.:....:.:..|           .:|.|    .|||  ..:|:..
  Fly   638 FYFISPMQRQNAKN--DAMCSLYEEMVRFHVC-----------EELYP----AISA--GLSYSLS 683

  Fly   658 EFDKHILLKTGGFDFKLHLI-EDVRDSKSYSLSVMIN-THALNNNVPEMF------ALCQELIK- 713
            ..:|.:|||..|::.||||| |.:.:.       |:| ...|:.|:...|      |....||| 
  Fly   684 TIEKGLLLKVCGYNEKLHLIVEAIAEG-------MLNVAETLDENMLSAFVKNQRKAFFNALIKP 741

  Fly   714 -----NVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSLLYGVDHIDFM 773
                 ::|....||::.|:.|....:|..:......:|     .|......::||:.|    ::.
  Fly   742 KALNRDIRLCVLERIRWLMINKYKCLSSVILEDMREFA-----HQFPKELYIQSLIQG----NYT 797

  Fly   774 KNFVHSTST------------------VDICDKL----STIASKVFNKDNMRGAINTTQSYEPSA 816
            :...|:...                  .||..||    |.|.....|..:....|.......|:.
  Fly   798 EESAHNVMNSLLSRLNCKQIRERGRFLEDITVKLPVGTSIIRCHALNVQDTNTVITNFYQIGPNT 862

  Fly   817 ISNYEKFLESL------PTFGKTQTSRNIHY 841
            : ..|..|:.|      |.|.:.:|...:.|
  Fly   863 V-RVESILDLLMMFVDEPLFDQLRTKEQLGY 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3107NP_001036470.1 Cym1 68..1003 CDD:223957 173/876 (20%)
Peptidase_M16 120..>177 CDD:279066 19/56 (34%)
Peptidase_M16_C 268..457 CDD:282978 34/201 (17%)
M16C_assoc 531..773 CDD:285556 61/293 (21%)
Nrd1NP_572757.2 Ptr 54..1023 CDD:223956 173/876 (20%)
Peptidase_M16 136..246 CDD:279066 29/110 (26%)
Peptidase_M16_C 289..472 CDD:282978 43/245 (18%)
Peptidase_M16_M 478..766 CDD:292805 69/328 (21%)
Peptidase_M16_C 769..953 CDD:282978 22/134 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445064
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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