DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC41C and CMD1

DIOPT Version :9

Sequence 1:NP_001246139.1 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_009667.1 Gene:CMD1 / 852406 SGDID:S000000313 Length:147 Species:Saccharomyces cerevisiae


Alignment Length:150 Identity:58/150 - (38%)
Similarity:95/150 - (63%) Gaps:4/150 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDELTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIE 65
            ||..||:||.|..:.||..||.:.||.|:::.:.|::..||....:|.:.|::.|:|.||:.|||
Yeast     1 MSSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 65

  Fly    66 FEEFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIE 130
            |.||..|.:|.|...|:|   .||.|||:::||.|:|.|:...|:.:|..:.:|||:.::|.|:.
Yeast    66 FSEFLALMSRQLKSNDSE---QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLR 127

  Fly   131 EIDSDGSGTVDFDEFMEVMT 150
            |: |||||.::..:|..:::
Yeast   128 EV-SDGSGEINIQQFAALLS 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_001246139.1 PTZ00184 1..150 CDD:185504 58/148 (39%)
CMD1NP_009667.1 PTZ00184 1..145 CDD:185504 58/147 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23050
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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