DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC41C and AT1G12310

DIOPT Version :10

Sequence 1:NP_523619.2 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_172695.1 Gene:AT1G12310 / 837785 AraportID:AT1G12310 Length:148 Species:Arabidopsis thaliana


Alignment Length:147 Identity:46/147 - (31%)
Similarity:79/147 - (53%) Gaps:5/147 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DELTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFE 67
            |.|:.:|.:.::.||..||.:.:|.|..:.:|.::..||.....|.|..|||  .|:.|...:|.
plant     4 DGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIA--SENLSSPFDFN 66

  Fly    68 EFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIEEI 132
            .|..|.|:.|..|..:   .:|::||::.||||.|::....||.||..:.:||..::.|..|:|:
plant    67 RFLDLMAKHLKTEPFD---RQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWIKEV 128

  Fly   133 DSDGSGTVDFDEFMEVM 149
            |....|.:.:::|:..|
plant   129 DVGSDGKIRYEDFIARM 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_523619.2 PTZ00184 1..150 CDD:185504 46/147 (31%)
AT1G12310NP_172695.1 PTZ00184 4..148 CDD:185504 46/147 (31%)

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