DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC41C and cabp4

DIOPT Version :9

Sequence 1:NP_001246139.1 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_021334000.1 Gene:cabp4 / 797905 ZFINID:ZDB-GENE-081104-291 Length:268 Species:Danio rerio


Alignment Length:149 Identity:45/149 - (30%)
Similarity:84/149 - (56%) Gaps:2/149 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ELTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFEE 68
            :|..|:...|..||..||.:::||::...|...:..:|:...:..|.:||.::.....|.::|::
Zfish   118 DLLPEELDELLEAFKEFDYDQDGYLHYKDVADCMRTMGYMPTEMELIEIIQQIKMKWGGHVDFDD 182

  Fly    69 FTTLAARFLVEEDAEAM-MAELKEAFRLYDKEGNGYITTGVLREILRE-LDDKLTNDDLDMMIEE 131
            |..|....::.|.|..: :.||..||:.:|.:|:|.||...|:|..:. |.:||...:|:.::.:
Zfish   183 FCELMGPRMLAETAHMVGLRELHCAFKQFDCDGDGRITFEELKESTKTLLGEKLKKGELEEILTD 247

  Fly   132 IDSDGSGTVDFDEFMEVMT 150
            ||.:|.|.||||||:.:::
Zfish   248 IDLNGDGNVDFDEFVMMLS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_001246139.1 PTZ00184 1..150 CDD:185504 45/147 (31%)
cabp4XP_021334000.1 EFh_PEF 130..265 CDD:330173 42/134 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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