DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC41C and Cabp4

DIOPT Version :10

Sequence 1:NP_523619.2 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_036017598.1 Gene:Cabp4 / 73660 MGIID:1920910 Length:297 Species:Mus musculus


Alignment Length:142 Identity:51/142 - (35%)
Similarity:78/142 - (54%) Gaps:2/142 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ELTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFEE 68
            ||..|:...|:.||..||.:::|||....:|..:..||:...:..|.::...|.....|.::|||
Mouse   121 ELGPEELEELQAAFEEFDTDQDGYIGYRELGDCMRTLGYMPTEMELLEVSQHVKMRMGGFVDFEE 185

  Fly    69 FTTLAARFLVEEDAEAM-MAELKEAFRLYDKEGNGYITTGVLREILRE-LDDKLTNDDLDMMIEE 131
            |..|.:..|.||.|..: :.||:.|||.:||:.:|.||...||:.... |.:.|...:||.|:.|
Mouse   186 FVELISPKLREETAHMLGVRELRIAFREFDKDRDGRITVAELRQAAPALLGEPLEGTELDEMLRE 250

  Fly   132 IDSDGSGTVDFD 143
            :|.:|.||:|||
Mouse   251 MDLNGDGTIDFD 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_523619.2 PTZ00184 1..150 CDD:185504 51/142 (36%)
Cabp4XP_036017598.1 PTZ00184 133..262 CDD:185504 45/128 (35%)

Return to query results.
Submit another query.