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Protein Alignment TpnC41C and Phf24
DIOPT Version :9
| Sequence 1: | NP_001246139.1 |
Gene: | TpnC41C / 35473 |
FlyBaseID: | FBgn0013348 |
Length: | 154 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_006238183.1 |
Gene: | Phf24 / 500446 |
RGDID: | 1559864 |
Length: | 400 |
Species: | Rattus norvegicus |
| Alignment Length: | 28 |
Identity: | 12/28 - (42%) |
| Similarity: | 16/28 - (57%) |
Gaps: | 4/28 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSDELTKEQTALLRNAFNAFDPEKNGYI 28
:||| .:||.| ..|.|.|||..|::
Rat 240 LSDE-QEEQAA---RQFAALDPEHRGHV 263
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| TpnC41C | NP_001246139.1 |
PTZ00184 |
1..150 |
CDD:185504 |
12/28 (43%) |
| Phf24 | XP_006238183.1 |
Zf_RING |
127..198 |
CDD:407013 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C166342441 |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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