DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC41C and Caps2

DIOPT Version :9

Sequence 1:NP_001246139.1 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_006241399.1 Gene:Caps2 / 366891 RGDID:1309826 Length:589 Species:Rattus norvegicus


Alignment Length:95 Identity:21/95 - (22%)
Similarity:34/95 - (35%) Gaps:35/95 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 EAMMAELKEA---------------FRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIEEI 132
            :|:..:|||.               |:..||||||         :|.:.|.:...:...:.:.|.
  Rat   402 QAIQEKLKEQLHTKGVRILTGLGKYFQRLDKEGNG---------LLEKTDFQQALETFHLEVSEQ 457

  Fly   133 DSDGS-----------GTVDFDEFMEVMTG 151
            |.:.|           ..||:.||...:.|
  Rat   458 DFESSWLILLGHGHSQNKVDYGEFKRAIFG 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_001246139.1 PTZ00184 1..150 CDD:185504 20/92 (22%)
Caps2XP_006241399.1 EF-hand_7 423..485 CDD:290234 16/70 (23%)
PTZ00183 482..>574 CDD:185503 1/6 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342447
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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