DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment TpnC41C and tnnc1a

DIOPT Version :9

Sequence 1:	NP_001246139.1	Gene:	TpnC41C / 35473	FlyBaseID:	FBgn0013348	Length:	154	Species:	Drosophila melanogaster
Sequence 2:	NP_852475.3	Gene:	tnnc1a / 353247	ZFINID:	ZDB-GENE-030523-1	Length:	161	Species:	Danio rerio

Alignment Length:	152	Identity:	56/152 - (36%)
Similarity:	89/152 - (58%)	Gaps:	3/152 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 SDELTKEQTALLRNAFNAF--DPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQI 64
            :::||.||....|.||:.|  |.| :|.|:|..:|.::.|||.......|.::|.||||||||.:
Zfish     9 AEQLTDEQKNEFRAAFDIFVQDAE-DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72

  Fly    65 EFEEFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMI 129
            :||||..:..|.:.::.......||.|.||::||..:|||....|:.:|....:.:|.||::.::
Zfish    73 DFEEFLVMMVRCMKDDSKGRPEEELAELFRMFDKNADGYIDLDELKLMLEATGEAITEDDIEELM 137

  Fly   130 EEIDSDGSGTVDFDEFMEVMTG 151
            .:.|.:..|.:|:|||:|.|.|
Zfish   138 RDGDKNNDGKIDYDEFLEFMKG 159

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
TpnC41C	NP_001246139.1	PTZ00184	1..150	CDD:185504	54/149 (36%)
tnnc1a	NP_852475.3	EFh_PEF	9..157	CDD:330173	54/148 (36%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910