DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC41C and Cabp2

DIOPT Version :10

Sequence 1:NP_523619.2 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_006531826.1 Gene:Cabp2 / 29866 MGIID:1352749 Length:324 Species:Mus musculus


Alignment Length:149 Identity:50/149 - (33%)
Similarity:90/149 - (60%) Gaps:5/149 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ELTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFEE 68
            ||..|:...|:.||..||.:::|||....:|..:..||:...:..|.:|..::   ..|:::||:
Mouse   178 ELRPEEIEELQIAFQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEISQQI---SGGKVDFED 239

  Fly    69 FTTLAARFLVEEDAEAM-MAELKEAFRLYDKEGNGYITTGVLREILRE-LDDKLTNDDLDMMIEE 131
            |..|....|:.|.|:.: :.||::|||.:|..|:|.|:.|.||..|:. |.::|:..::|.::::
Mouse   240 FVELMGPKLLAETADMIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQD 304

  Fly   132 IDSDGSGTVDFDEFMEVMT 150
            ||.:|.|.|||:||:.:|:
Mouse   305 IDLNGDGLVDFEEFVRMMS 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_523619.2 PTZ00184 1..150 CDD:185504 49/147 (33%)
Cabp2XP_006531826.1 PTZ00184 178..322 CDD:185504 49/146 (34%)

Return to query results.
Submit another query.