DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC41C and Tnnc1

DIOPT Version :9

Sequence 1:NP_001246139.1 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001029277.1 Gene:Tnnc1 / 290561 RGDID:1309921 Length:161 Species:Rattus norvegicus


Alignment Length:150 Identity:51/150 - (34%)
Similarity:90/150 - (60%) Gaps:1/150 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DELTKEQTALLRNAFNAFD-PEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEF 66
            ::||:||....:.||:.|. ..::|.|:|..:|.::.|||.......|.::|.||||||||.::|
  Rat    10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74

  Fly    67 EEFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIEE 131
            :||..:..|.:.::.......||.:.||::||..:|||....|:.:|:...:.:|.||::.::::
  Rat    75 DEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKD 139

  Fly   132 IDSDGSGTVDFDEFMEVMTG 151
            .|.:..|.:|:|||:|.|.|
  Rat   140 GDKNNDGRIDYDEFLEFMKG 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_001246139.1 PTZ00184 1..150 CDD:185504 49/147 (33%)
Tnnc1NP_001029277.1 PTZ00184 9..157 CDD:185504 49/146 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.