DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC41C and cal-3

DIOPT Version :9

Sequence 1:NP_001246139.1 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_500421.2 Gene:cal-3 / 177143 WormBaseID:WBGene00000287 Length:234 Species:Caenorhabditis elegans


Alignment Length:147 Identity:47/147 - (31%)
Similarity:87/147 - (59%) Gaps:4/147 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ELTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFEE 68
            :||:|:....:.||..||.:.||.|:...:|..:..||....:..:.:||.:||.||:||:||.|
 Worm    92 QLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGNGQVEFPE 156

  Fly    69 FTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIEEID 133
            |..:..|.:.|.|:|.    ::|||:::|::|||.||....:..:..:.......:::.|:.|:|
 Worm   157 FCVMMKRIMKETDSEM----IREAFKIFDRDGNGVITANEFKLFMINMGMCFDEVEVEEMMNEVD 217

  Fly   134 SDGSGTVDFDEFMEVMT 150
            .||:|.:|::||:::.:
 Worm   218 CDGNGEIDYEEFVKIFS 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_001246139.1 PTZ00184 1..150 CDD:185504 47/145 (32%)
cal-3NP_500421.2 PTZ00184 92..232 CDD:185504 47/143 (33%)
EFh 100..162 CDD:238008 22/61 (36%)
EFh 172..234 CDD:238008 18/65 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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