DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC41C and calml4b

DIOPT Version :9

Sequence 1:NP_001246139.1 Gene:TpnC41C / 35473 FlyBaseID:FBgn0013348 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_021326249.1 Gene:calml4b / 100321746 ZFINID:ZDB-GENE-071009-6 Length:166 Species:Danio rerio


Alignment Length:155 Identity:37/155 - (23%)
Similarity:75/155 - (48%) Gaps:13/155 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDELTKEQTALLRNAFNAFDPEKNGYINTAMVGTILSMLG-----HQLDDATLADIIAEVDEDG 60
            |:..|:::|....:..|:.:|.::.|.:....:.|::|.||     .:|....|:..|     |.
Zfish     1 MAKFLSQDQINEYKECFSLYDQKRKGKLKVQDLLTVMSSLGCCPTLPELHRHLLSHKI-----DK 60

  Fly    61 SGQIEFEEFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDL 125
            .|:::|..|.::....:.:|:..   ||:.:|.||.|.|..|:||...||..|....:||.:.::
Zfish    61 HGELDFSTFLSIMHEQIQQENPR---AEILQAVRLTDTEKRGFITAAELRARLTHFGEKLRDQEV 122

  Fly   126 DMMIEEIDSDGSGTVDFDEFMEVMT 150
            |.::.|......|.:.:::...::|
Zfish   123 DELLSEAGVANDGQIKYEDCERIVT 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC41CNP_001246139.1 PTZ00184 1..150 CDD:185504 36/153 (24%)
calml4bXP_021326249.1 EFh_PEF 1..141 CDD:330173 36/147 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23050
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.