DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tif-IA and AT2G39240

DIOPT Version :9

Sequence 1:NP_788084.1 Gene:Tif-IA / 35454 FlyBaseID:FBgn0032988 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001324384.1 Gene:AT2G39240 / 818509 AraportID:AT2G39240 Length:573 Species:Arabidopsis thaliana


Alignment Length:627 Identity:143/627 - (22%)
Similarity:248/627 - (39%) Gaps:139/627 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EKGLAESVRVAL------EERNFHLVKEFTYF---------LREAELSDDEVVIIIKDA--KRIV 87
            :|.|..::|..|      :...::.:.:..|.         :.:.|:.||..|:..::.  |.:.
plant    13 DKALVSAIREVLASAQSGDTDQYNELVQLMYIKKKKSGDDAMAQPEVPDDVDVVAQRETLLKILS 77

  Fly    88 HNLT----PEFVTVVEALLSLNWKKRSSEIIEAYTEFCIELMVTHNRYLPIGVSKLI--VHWIPG 146
            |::.    .....:::.:|..........:|.|..:..|.|..|..::|...:..|:  :...|.
plant    78 HSVACLDDVHHNHLLQLILGTRIWDHKPNVIYALLDLIISLATTSGKHLSSCLDTLVSNLRSQPR 142

  Fly   147 DMDESDWVHGCPSEHVRNELKPIHKVLDRILTAVPMAFDIIIDAISAKFP--YFKKPYHVTAGYL 209
            .:|..          :...|..:|..|.:|...||:|..|::..::...|  :.|....|...|:
plant   143 KLDNK----------MLEVLSRVHAALHKISYLVPLAPSILLPILAQSMPSVHDKARLQVVVPYV 197

  Fly   210 YNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAPKD-EIELEMNDEEEKVEADTLFEID-DVCAEN 272
            .|:|.|..     ..::.::|.:.:|::.:...:| :.|:|.:|..:...:..:|::: ||..|.
plant   198 KNLLKLEN-----SSIIGKVVGKDILMMVMGRFRDLDSEIECDDNLQNDSSLAMFDMELDVAVEG 257

  Fly   273 VPKSEKSVSHPVGKTLDVCLFLLYKFFDGKCRLNENSSEEQRRTANRLFKMLLYLFDEVLLPSHN 337
            .         .|.|.||   .|:.:.|      |...|.:.....:.:|:.|...|:.::|.:..
plant   258 T---------LVSKLLD---DLMVESF------NHLKSCQDAGRLDEVFENLFESFENLILNTQK 304

  Fly   338 THHVQFILFYATSL---------RSVYSEAFLDSLWTKVQNPNVSAVIRHAAVGYMASFLSRARF 393
            ....||::|||.||         .|...|.||.|        |.:.|.|..||.|:||:|:||.|
plant   305 LKFSQFLMFYACSLDPENCGVKFASKLLEKFLSS--------NNNQVTRTNAVTYLASYLARANF 361

  Fly   394 LPLSTVTFYLKELTRWAHTYIDDSDAYKQNCSLKA----NLVFYSVCQAVFYLIAFRAKDLTASS 454
            |..|.|...||.|       :|:...|.:.|:..|    :.||||.|||:.|::.||.:.:.   
plant   362 LSASFVASMLKRL-------VDECADYCRTCNDDARPEVHQVFYSGCQAILYVLCFRMRSIL--- 416

  Fly   455 KDLLFLQSLQLSRL--AMCH-LNPLRYCLAPVATAFAGVTRTYQLAYCHTVLERNA-------RR 509
             ::...|| ||:.|  .:.| |:|||.||:.|.:.|     ..|...|...:..:|       ..
plant   417 -EVPHFQS-QLTPLESVLSHKLDPLRVCLSSVVSEF-----LIQAKACGLFIVSDAFIFDDLSES 474

  Fly   510 KLATVYGHEKCMPDETLESFFPF-----------DPYVLKLS---KKYIETNYMVY----QSNDT 556
            :|:...|           .||||           .|:.:|.|   |.|.:....||    ...|:
plant   475 ELSRALG-----------GFFPFPWLLEKSNSLISPHFIKRSEVKKTYEQAEVTVYGDTDNEEDS 528

  Fly   557 DEYVYGSNKYGHSRKRGDSEMLEEDEFLIVDKRPKNFDLSKS 598
            |:.|...|:...........::.|.|.|:  |.|.....|.|
plant   529 DDDVDPDNEMNKMSITPKHSVMHETERLL--KMPSRISPSTS 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tif-IANP_788084.1 RRN3 40..553 CDD:283082 132/580 (23%)
AT2G39240NP_001324384.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 124 1.000 Domainoid score I1809
eggNOG 1 0.900 - - E1_KOG2434
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39531
Inparanoid 1 1.050 126 1.000 Inparanoid score I1929
OMA 1 1.010 - - QHG55528
OrthoDB 1 1.010 - - D855834at2759
OrthoFinder 1 1.000 - - FOG0002748
OrthoInspector 1 1.000 - - otm3288
orthoMCL 1 0.900 - - OOG6_102817
Panther 1 1.100 - - O PTHR12790
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2132
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

Return to query results.
Submit another query.