Protein Alignment Tif-IA and rrn3

DIOPT Version :10

• Sequence 1: NP_788084.1
• Gene: Tif-IA / 35454
• FlyBaseID: FBgn0032988
• Length: 611
• Species: Drosophila melanogaster
• Sequence 2: XP_002937728.1
• Gene: rrn3 / 100497648
• XenbaseID: XB-GENE-990491
• Length: 613
• Species: Xenopus tropicalis
• Alignment Length: 571
• Identity: 191/571 - (33%)
• Similarity: 302/571 - (52%)
• Gaps: 47/571 - (8%)

  Fly    55 NFHLVKEFTYFLREAELSDDEVVIIIKDAKRIVHNLTPEFVTVVEALLSLNWKKRSSEIIEAYTE 119
            :|.|:|   :.|.:.|:.|.:::..:.:.:..:..||.::..:|..:|.|.|..||.|::|.|..
 Frog    37 DFELLK---HQLSDPEIKDVQLLNWLHEFRSCITYLTKDYEQLVSIVLKLPWLNRSKEVVEEYLS 98

  Fly   120 FCIELMVTHNRYLPIGVSKLIVHWIP-------GDMDESDWVHGCPSEHVRNELKPIHKVLDRIL 177
            |...|:.....||...:|.:|.|::|       ||:|.||  .....|.:.:.....|:.|..|.
 Frog    99 FLGNLVSAQTVYLRSCLSMIISHFVPARVIIRDGDVDISD--SDDEDEDIISTFNTCHRALQIIA 161

  Fly   178 TAVPMAFDIIIDAISAKFPYFKKPYHVTAGYLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAP 242
            ..||.|...::..:..||||..|.......|::|:|.:..|.|.....:.:||::|||.:||:|.
 Frog   162 KYVPSAPRFLMPILVEKFPYTNKSARTLECYVHNLLRISIYFPTLRLEILELVVEKLLKMDVSAS 226

  Fly   243 KDEIE------LEMNDEEEKVEADTLFEIDDVCAENVPKS--EKSVSHPVGKTLDVCLFLLYKFF 299
            :..||      .:...|:.|.|.  ||.:|:...|....|  .::::|||.:.||:.:..|..:.
 Frog   227 RQNIEEAEESAYQGGGEQNKEEG--LFNMDEDLQEMTTTSVVNETMAHPVAERLDILILTLCSYI 289

  Fly   300 DGKCRLNENSSEEQRRTANRLFKMLLYLFDEVLLPSHNTHHVQFILFYATSLRSVYSEAFLDSLW 364
            ...|.  .|.:.:..:|.: :::.||.:||:::||:|.:.|||:.:||..|.|...:|||::.||
 Frog   290 KDVCL--TNGALDLNKTKD-MYRDLLAVFDKLILPTHASCHVQYFMFYICSFRLGIAEAFVEHLW 351

  Fly   365 TKVQNPNVSAVIRHAAVGYMASFLSRARFLPLSTVTFYLKELTRWAHTYIDDSDA-YKQNCSLKA 428
            .|:||||...|||.||..|:.|||:||:|:||.||...|..|..|.|.|||:.|| .:..|.:..
 Frog   352 KKLQNPNNPPVIRQAAANYIGSFLARAKFIPLVTVKACLDLLVNWLHGYIDNQDAGSRAYCDVTV 416

  Fly   429 NLVFYSVCQAVFYLIAFRAKDLTASS--KDLLFLQSLQLSRLAMCHLNPLRYCLAPVATAFAGVT 491
            :..||:.||||||...||.......:  |.|.:||:|.|.|:.||.||||:.||..|...||.:|
 Frog   417 HGPFYAACQAVFYSFIFRHNQFLEGNMRKGLAYLQNLNLERIVMCQLNPLKICLPSVVNFFAAIT 481

  Fly   492 RTYQLAYCHTVLERNARRKL----ATVYGHEKCMPDETLESFFPFDPYVLKLSKKYIETNYMVYQ 552
            |.|||.:|:|::|||.|:.:    ::..|....:....|:|||||||.:||..||.::..|.|::
 Frog   482 RKYQLVFCYTIIERNNRQMIPIIRSSTGGDSVQVSFNPLDSFFPFDPCILKRCKKLMDPFYQVWE 546

  Fly   553 SNDTDEYVYGSNKYGHSRKRGDSEMLEEDEFL---------IVDKRPKNFD 594
            .::|:: :.|..|:..|....|     ||:||         .|:..|.:||
 Frog   547 ESNTED-LKGGQKHIKSSTADD-----EDDFLKGQTPQNDSSVEMTPGSFD 591

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tif-IA	NP_788084.1	RRN3	39..556	CDD:461623	178/522 (34%)
rrn3	XP_002937728.1	RRN3	31..550	CDD:461623	178/522 (34%)