DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL21 and AT1G09690

DIOPT Version :10

Sequence 1:NP_610144.1 Gene:RpL21 / 35453 FlyBaseID:FBgn0032987 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_563849.1 Gene:AT1G09690 / 837497 AraportID:AT1G09690 Length:164 Species:Arabidopsis thaliana


Alignment Length:160 Identity:82/160 - (51%)
Similarity:113/160 - (70%) Gaps:5/160 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIF 65
            |....|.|..|||:|:|||||.|.||||||:|.||:||.||:|.:||:.||:|:|.|||:||||:
plant     1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIW 65

  Fly    66 NVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKR 130
            |||:.||||.|||::..:|:.||::||:||:..|:|.|:|..|.|:|:.|...||..|:.:|.||
plant    66 NVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKR 130

  Fly   131 QPEQPKKAHFVK--KLEEPIALAPIPYEFI 158
            ||:.||....|:  .||   .:.||||:.:
plant   131 QPKGPKPGFMVEGMTLE---TVTPIPYDVV 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL21NP_610144.1 PTZ00189 1..159 CDD:240309 82/160 (51%)
AT1G09690NP_563849.1 PLN00190 1..158 CDD:177784 82/160 (51%)

Return to query results.
Submit another query.