DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL21 and Rpl21

DIOPT Version :9

Sequence 1:NP_001260689.1 Gene:RpL21 / 35453 FlyBaseID:FBgn0032987 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_445782.1 Gene:Rpl21 / 79449 RGDID:68390 Length:160 Species:Rattus norvegicus


Alignment Length:160 Identity:115/160 - (71%)
Similarity:137/160 - (85%) Gaps:1/160 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIF 65
            |||:||.|||||.|||||||||||:||:||||::|.||||||||.|.||||:|:|.|||||||::
  Rat     1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 65

  Fly    66 NVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKR 130
            ||||||||:||||:|:|||||||:|||||||.|||.|:.||:|||||::..|||||||.||.|..
  Rat    66 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNG 130

  Fly   131 QPEQPKKAHFVK-KLEEPIALAPIPYEFIA 159
            ||..|::||||: ..:||..|.||||||:|
  Rat   131 QPAPPREAHFVRTNGKEPELLEPIPYEFMA 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL21NP_001260689.1 PTZ00189 1..159 CDD:240309 114/158 (72%)
Rpl21NP_445782.1 PTZ00189 1..160 CDD:240309 114/158 (72%)
Ribosomal_L21e 5..97 CDD:279498 73/91 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..146 18/33 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341600
Domainoid 1 1.000 175 1.000 Domainoid score I3539
eggNOG 1 0.900 - - E1_COG2139
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128048
Inparanoid 1 1.050 244 1.000 Inparanoid score I3206
OMA 1 1.010 - - QHG53731
OrthoDB 1 1.010 - - D1455026at2759
OrthoFinder 1 1.000 - - FOG0000366
OrthoInspector 1 1.000 - - otm45256
orthoMCL 1 0.900 - - OOG6_100663
Panther 1 1.100 - - O PTHR20981
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X172
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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