DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL21 and rpl-21

DIOPT Version :9

Sequence 1:NP_001260689.1 Gene:RpL21 / 35453 FlyBaseID:FBgn0032987 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_498774.1 Gene:rpl-21 / 176146 WormBaseID:WBGene00004433 Length:161 Species:Caenorhabditis elegans


Alignment Length:161 Identity:103/161 - (63%)
Similarity:121/161 - (75%) Gaps:2/161 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIF 65
            ||||||.|||||.||:|.||||||..||||...:|.||:||||.:||.|||:|:|||||:|||||
 Worm     1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIF 65

  Fly    66 NVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWV-SLK 129
            |||:.|||:||||||||.||.||:|:|||||..||||.|||.|||.|:...|.||..||.| :||
 Worm    66 NVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALK 130

  Fly   130 RQPEQPKKAHFV-KKLEEPIALAPIPYEFIA 159
            |.|..|:.||.| .:..||..|||:.:|.:|
 Worm   131 RLPVAPRGAHTVTTQNNEPELLAPLRFEIVA 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL21NP_001260689.1 PTZ00189 1..159 CDD:240309 102/159 (64%)
rpl-21NP_498774.1 PTZ00189 1..158 CDD:240309 101/156 (65%)
Ribosomal_L21e 5..97 CDD:279498 66/91 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159724
Domainoid 1 1.000 153 1.000 Domainoid score I2632
eggNOG 1 0.900 - - E1_COG2139
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128048
Inparanoid 1 1.050 196 1.000 Inparanoid score I2517
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53731
OrthoDB 1 1.010 - - D1455026at2759
OrthoFinder 1 1.000 - - FOG0000366
OrthoInspector 1 1.000 - - oto18578
orthoMCL 1 0.900 - - OOG6_100663
Panther 1 1.100 - - LDO PTHR20981
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1117
SonicParanoid 1 1.000 - - X172
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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