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Protein Alignment RpL21 and LOC108349002
DIOPT Version :9
Sequence 1: | NP_001260689.1 |
Gene: | RpL21 / 35453 |
FlyBaseID: | FBgn0032987 |
Length: | 159 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017446047.1 |
Gene: | LOC108349002 / 108349002 |
RGDID: | 11468718 |
Length: | 160 |
Species: | Rattus norvegicus |
Alignment Length: | 160 |
Identity: | 113/160 - (70%) |
Similarity: | 138/160 - (86%) |
Gaps: | 1/160 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIF 65
|||:||.|||||.|||||||||||:||:||||::|.||||||||.|.||||:|::.|||||||::
Rat 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHECYHGKTGRVY 65
Fly 66 NVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKR 130
||||||||:||||:|:|||||||:||:||||.|||.|:.||:|||||::..|||||||.||.|||
Rat 66 NVTQHAVGIIVNKQVKGKILAKRINVQIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKR 130
Fly 131 QPEQPKKAHFVK-KLEEPIALAPIPYEFIA 159
||..|::||||: ..:||..|.||.|:|:|
Rat 131 QPWPPREAHFVRTNGKEPELLEPIQYQFMA 160
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RpL21 | NP_001260689.1 |
PTZ00189 |
1..159 |
CDD:240309 |
112/158 (71%) |
LOC108349002 | XP_017446047.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1455026at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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