DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nubpl and HCF101

DIOPT Version :10

Sequence 1:NP_610143.3 Gene:Nubpl / 35452 FlyBaseID:FBgn0032986 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_189086.1 Gene:HCF101 / 822033 AraportID:AT3G24430 Length:532 Species:Arabidopsis thaliana


Alignment Length:250 Identity:101/250 - (40%)
Similarity:140/250 - (56%) Gaps:17/250 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VQDIIVVASGKGGVGKSTVAVNFACSLAKLGKRVGLLDGDIFGPTIPLLMNVHGEPV-VN-DKNL 100
            :.:||.|:|.||||||||||||.|.:||.:|.|||:.|.|::||::|.::|.....: :| :|..
plant   175 ISNIIAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVNPESRILEMNPEKKT 239

  Fly   101 MIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQRLLKGTDWGLLDVLVIDTPPGTGDVHLSL 165
            :||.:...||.:|.|...  :...|.|||:|...|.:||..|:||.||.||||.||||||:.|:|
plant   240 IIPTEYMGVKLVSFGFAG--QGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTL 302

  Fly   166 SQHAPITGVILVTTPHTAAVQVTLKGASMYEKLNVPIFGVVENMKYTICQ---NCNQRLEFFKDS 227
            .|.||:|..::||||...|.....||..|:.||.||...|||||    |.   :..:...|.|.|
plant   303 CQVAPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENM----CHFDADGKRYYPFGKGS 363

  Fly   228 -----RISSLPRKLISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEITQ 277
                 :...:|. |..||:...::.|.:||.|.|:..|.|..:..|..|...:.|
plant   364 GSEVVKQFGIPH-LFDLPIRPTLSASGDSGTPEVVSDPLSDVARTFQDLGVCVVQ 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NubplNP_610143.3 ParA 37..275 CDD:431392 100/246 (41%)
HCF101NP_189086.1 PaaD 73..160 CDD:441754
ParA 174..411 CDD:431392 99/242 (41%)
GBBH-like_N 448..515 CDD:461840
Blue background indicates that the domain is not in the aligned region.

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