DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3262 and nubp1

DIOPT Version :9

Sequence 1:NP_001260688.1 Gene:CG3262 / 35452 FlyBaseID:FBgn0032986 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_001015835.1 Gene:nubp1 / 548552 XenbaseID:XB-GENE-992726 Length:320 Species:Xenopus tropicalis


Alignment Length:278 Identity:97/278 - (34%)
Similarity:144/278 - (51%) Gaps:39/278 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KQPIIGVQDIIVVASGKGGVGKSTVAVNFACSLAK-LGKRVGLLDGDIFGPTIPLLMNVHGE--- 92
            |:.:..|:..|:|.||||||||||.:.:.|..||: ..|.|.|||.||.||:||.:|.:.||   
 Frog    51 KEKLSSVKHKILVLSGKGGVGKSTFSAHLAHGLAQDESKEVALLDVDICGPSIPKMMGLEGEQVH 115

  Fly    93 -------PVVNDKNLMIPPQNYNVKCLSMG-MLTPVETSVIWRGPLVMSAIQRLLKGTDWGLLDV 149
                   ||..:.||.:         :|:| :|:..:.:||||||.....|::.|:..|||.:|.
 Frog   116 QSGSGWSPVYVEDNLAV---------MSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDY 171

  Fly   150 LVIDTPPGTGDVHLSLSQH---APITGVILVTTPHTAAVQVTLKGASMYEKLNVPIFGVVENMKY 211
            |:|||||||.|.|||:.|:   |.|.|.:::|||...::|...|..:...|:.:||.||||||..
 Frog   172 LIIDTPPGTSDEHLSVVQYLSVAGIDGAVIITTPQEVSLQDVRKEINFCHKVKLPIIGVVENMSG 236

  Fly   212 TICQNCNQRLEFF-----------KDSRISSLPRKLISLPLDSRIADSNESGVPVVIKYPDSKYS 265
            .||..|....:.|           .|..:|.|.:    :|||..|..|.::|.....:.|||..:
 Frog   237 FICPKCKNESQIFPPTTGGAEKMCTDLNVSLLGK----VPLDPNIGKSCDTGKSFFSEIPDSPAT 297

  Fly   266 YLFTQLAEEITQILNEQR 283
            ..:..:.:.|.....:::
 Frog   298 LSYRTIIQRIQDYCEKKK 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3262NP_001260688.1 ParA 37..275 CDD:287566 95/263 (36%)
minD_arch 41..281 CDD:131024 95/265 (36%)
nubp1NP_001015835.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
ParA 57..307 CDD:313763 95/262 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53899
OrthoDB 1 1.010 - - D1166096at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

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