DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nubpl and Nubp1

DIOPT Version :10

Sequence 1:NP_610143.3 Gene:Nubpl / 35452 FlyBaseID:FBgn0032986 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_036085.1 Gene:Nubp1 / 26425 MGIID:1347073 Length:320 Species:Mus musculus


Alignment Length:280 Identity:101/280 - (36%)
Similarity:148/280 - (52%) Gaps:44/280 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VQDIIVVASGKGGVGKSTVAVNFACSLAKLG-KRVGLLDGDIFGPTIPLLMNVHGE--------- 92
            |:..::|.||||||||||.:.:.|..||:.| .:|.|||.||.||:||.:|.:.||         
Mouse    53 VRHKLLVLSGKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKIMGLEGEQVHQSGSGW 117

  Fly    93 -PVVNDKNLMIPPQNYNVKCLSMG-MLTPVETSVIWRGPLVMSAIQRLLKGTDWGLLDVLVIDTP 155
             ||..|.||.:         :|:| :|:..:.:||||||.....|::.|:..|||.:|.|::|||
Mouse   118 SPVYVDDNLGV---------MSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGDVDYLIVDTP 173

  Fly   156 PGTGDVHLSLSQH---APITGVILVTTPHTAAVQVTLKGASMYEKLNVPIFGVVENMKYTICQNC 217
            |||.|.|||:.|:   |.|.|.:::|||...|:|...|..|...|:.:||.||||||...||..|
Mouse   174 PGTSDEHLSVVQYLAAAHIDGAVILTTPQEVALQDVRKEISFCHKVKLPIIGVVENMSGFICPKC 238

  Fly   218 NQRLEFF-----------KDSRISSLPRKLISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQL 271
            .:..:.|           :|.||..|.:    :|||..|..|.:.|....::.|||..:..:..:
Mouse   239 KKESQIFPPTTGGAEAMCQDLRIPLLGK----VPLDPHIGKSCDKGQSFFVEAPDSPATAAYRSI 299

  Fly   272 AEEITQILNEQRCNQNQNNS 291
            .:.|...     ||.:|:::
Mouse   300 IQRIRDF-----CNSHQSHA 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NubplNP_610143.3 ParA 37..275 CDD:431392 97/262 (37%)
Nubp1NP_036085.1 ParA 53..303 CDD:431392 97/262 (37%)

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